Protein Overview: mlo3

General Information:
Name(s) found:	mlo3 / SPBC1D7.04 [Sanger Pombe]
Description(s) found: Found 20 descriptions. SHOW ALL	RNA annealing factor Mlo3 [Sanger Pombe]
Organism:	Schizosaccharomyces pombe
Length:	199 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA ] transcription export complex [ISS]
Biological Process:	poly(A)+ mRNA export from nucleus [IGI][IMP]
Molecular Function:	protein binding [IPI] RNA binding [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMELDQSLD AIIASKPKGG IRKRRARSNK PKPTKNAKPA VNTASALKSV ISEESKIIVS  60
   61 NLPTDVTEAQ VKELFVKSIG PCKRVSLAYG PNGRSKGIAT IIFSRPGDAT RAYEQYEGRL 120
  121 VDGTRKMKVE IILDPSRQLN SLAARVSPAS NASATASKNG AKSSKRKTTR RRRTPNRPKK 180
  181 SAEELDKEMD DYFGSNEKE

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..199]	PSI-BLAST	16.09691	Poly(A)-binding protein

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
RNA binding	4.43921816934576	bayes_pls_golite062009
binding	3.19379300171257	bayes_pls_golite062009
mRNA binding	3.1794312979994	bayes_pls_golite062009
nucleic acid binding	2.34356093608328	bayes_pls_golite062009
protein binding	1.52056358240529	bayes_pls_golite062009
single-stranded RNA binding	0.851308060174055	bayes_pls_golite062009
transporter activity	0.628672636801176	bayes_pls_golite062009
transmembrane transporter activity	0.505106991526286	bayes_pls_golite062009
mRNA 3'-UTR binding	0.414871108842203	bayes_pls_golite062009
substrate-specific transporter activity	0.182749906784328	bayes_pls_golite062009
poly-purine tract binding	0.15653271757169	bayes_pls_golite062009
poly-pyrimidine tract binding	0.11509546367801	bayes_pls_golite062009
nucleoside-triphosphatase activity	0.096231856558874	bayes_pls_golite062009
pyrophosphatase activity	0.059732432409948	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides	0.0510390778764699	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	0.0484248928275733	bayes_pls_golite062009
poly(A) RNA binding	0.0459878286238641	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle