| Protein: | mlo3 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 199 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mlo3.
| Description | E-value | Query Range |
Subject Range |
|
|
133.0 | [0..2] | [180..274] |
|
|
128.0 | [0..4] | [190..243] |
|
|
128.0 | [0..4] | [190..252] |
|
Region A: Residues: [1-199] |
1 11 21 31 41 51
| | | | | |
1 MSMELDQSLD AIIASKPKGG IRKRRARSNK PKPTKNAKPA VNTASALKSV ISEESKIIVS 60
61 NLPTDVTEAQ VKELFVKSIG PCKRVSLAYG PNGRSKGIAT IIFSRPGDAT RAYEQYEGRL 120
121 VDGTRKMKVE IILDPSRQLN SLAARVSPAS NASATASKNG AKSSKRKTTR RRRTPNRPKK 180
181 SAEELDKEMD DYFGSNEKE
|
| Detection Method: |  |
| Confidence: | 16.09691 |
| Match: | 1cvjA |
| Description: | Poly(A)-binding protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 4.43921816934576 | bayes_pls_golite062009 |
| binding | 3.19379300171257 | bayes_pls_golite062009 |
| mRNA binding | 3.1794312979994 | bayes_pls_golite062009 |
| nucleic acid binding | 2.34356093608328 | bayes_pls_golite062009 |
| protein binding | 1.52056358240529 | bayes_pls_golite062009 |
| single-stranded RNA binding | 0.851308060174055 | bayes_pls_golite062009 |
| transporter activity | 0.628672636801176 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.505106991526286 | bayes_pls_golite062009 |
| mRNA 3'-UTR binding | 0.414871108842203 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.182749906784328 | bayes_pls_golite062009 |
| poly-purine tract binding | 0.15653271757169 | bayes_pls_golite062009 |
| poly-pyrimidine tract binding | 0.11509546367801 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.096231856558874 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.059732432409948 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0510390778764699 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.0484248928275733 | bayes_pls_golite062009 |
| poly(A) RNA binding | 0.0459878286238641 | bayes_pls_golite062009 |
