YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: met3 (reserved)

General Information:
Name(s) found: met3 (reserved) / SPBC15D4.09c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • cystathionine gamma-synthase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 610 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine [ISSLink to PubMed article]
    cysteine metabolic process [ISSLink to PubMed article]
    Molecular Function: cystathionine gamma-synthase activity [ISSLink to PubMed article]
    pyridoxal phosphate binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSANISYLVN PPTEVGSSIP ADTEHAISVT LPTWKSNVGY EEGDPNVTTK MKSGYPRFFI  60
   61 SAHVKDCISI IKKFPEIEIL KLKDYDMFLY PSLSVAKQSA AFLESKGPID SAEVIIYDAT 120
  121 KGLRKHLDSI DRNRKYTEEI HIPQVYSVLF PSKYFGIAKQ FWQHTGDGIS SRRAAAFLHS 180
  181 YKKIQSISEF LVAQRSISHL KSKSRSRYAS HPDLQALNTW MTNEGNQAND EMEDVSLYLE 240
  241 ERYGRNLDLS LATAAKLVLR RRIAGTLKDE VDLQKALPKE GSQYLREVKG LSHDDVFLFP 300
  301 TGMSAIYNTH RILRLVLDDS RKSVCFGFCY VDTLKILQKW GSGCYFYGLG NDEQLDEFEK 360
  361 RLESGEKVMA LFCEFPSNPL LNSPDLVRIR KLADSYDFAV VVDETIGNFV NVEVLPLADV 420
  421 VVSSLTKIFS GDSNVMGGSM VLNPSSRYYS RIKDAMKALY EDLLYDEDAL TLERNSRDFA 480
  481 ERSQVINHNA ETICNLLYQN PKIKTLYYPK YNTSKEHFEA CRRENGGYGG LLSVVFHNPE 540
  541 DARQFYDKIQ VAKGPSLGTN FTLASPYAIL AHYQELDWAG ENGIDRNLVR VSVGMEPSEH 600
  601 LKNVFINALS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..129] deduced N/A No confident structure predictions are available.
    2 View Details [130..227] PSI-BLAST 3.09691 No description for 2du9A was found.
    3 View Details [228..610] PSI-BLAST 68.045757 Crystal structure of Citrobacter Freundii L-methionine-lyase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  1.87460342369605 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  1.80372125032222 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  1.80372125032222 bayes_pls_golite062009
  • transferase activity
    		•  1.44093490824786 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • carbon-sulfur lyase activity
    		•  0.698312655247044 bayes_pls_golite062009
  • cystathionine beta-lyase activity
    		•  0.6849039330512 bayes_pls_golite062009
  • binding
    		•  0.536634592992536 bayes_pls_golite062009
  • cystathionine gamma-lyase activity
    		•  0.505859361763689 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  0.271623203801431 bayes_pls_golite062009
  • O-phospho-L-serine:2-oxoglutarate aminotransferase activity
    		•  0.234399054481664 bayes_pls_golite062009
  • pyridoxal phosphate binding
    		•  0.16957228630576 bayes_pls_golite062009
  • vitamin B6 binding
    		•  0.16957228630576 bayes_pls_golite062009
  • adenosylmethionine-8-amino-7-oxononanoate transaminase activity
    		•  0.0669652799570574 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.013097682076602 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle