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Protein Overview: clc1

General Information:
Name(s) found: clc1 / SPBC9B6.08 [Sanger Pombe]
Description(s) found:
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  • gi|7490239|pir||T40789 clathrin light chain - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|4760346|emb|CAB42369.1| clathrin light chain [Schizosaccharomyces pombe] [NCBI NR]
  • gi|26392331|sp|Q9USP6.1|CLC1_SCHPO RecName: Full=Clathrin light chain; Short=CLC [NCBI NR]
  • gi|19112542|ref|NP_595750.1| clathrin light chain [Schizosaccharomyces pombe] [NCBI NR]
  • clathrin light chain [Sanger Pombe]
  • Clathrin light chain OS=Schizosaccharomyces pombe GN=clc1 PE=1 SV=1 [Swiss-Prot]
  • CLATHRIN LIGHT CHAIN; INVOLVED IN THE INTERNALISATION STEP OF ENDOCYTOSIS: O42710;Q9USP6; [pompepVF.fasta]
  • Clathrin light chain (CLC) [pompep4896]
  • |clc1||clathrin light chain [pompepnew.fasta]
  • |clc1||clathrin light chain|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • clathrin light chain [Schizosaccharomyces pombe]gi|4760346|emb|CAB42369.1| clc1 [Schizosaccharomyces pombe]gi|26392331|sp|Q9USP6|CLC1_SCHPO Clathrin light chain (CLC)gi|7490239|pir||T40789 clathrin light chain - fission yeast (Schizosaccharomyces pombe [nrdb_11152004_Chlamydomonas]
  • (Q9USP6) Clathrin light chain (CLC) [pompep4896_normal_reversed]
  • hypothetical protein SPBC9B6.08 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC9B6.08 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Clathrin light chain OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=clc1 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 229 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    coated pit [IEA]
    Golgi apparatus [IDALink to PubMed article]
    clathrin vesicle coat [ISSLink to PubMed article]
    Biological Process: vesicle-mediated transport [ISSLink to PubMed article]
    intracellular protein transport [RCALink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQFPALEDF DDGLVTAPVD DSKNNTDFLE REKLALGEDA GQFETPEDKD ALLNFENDSE  60
   61 AEQTRFEQNF PPIDAEMQAS GTFSAPKAPY MGQAEVHPPE DESGDPEPVR KWKEDQMKRI 120
  121 QERDESSKKL RESNIEKARK AIDDFYENFN DKRDKVIAKS RKEQEKLLEE NESKSTGTTS 180
  181 WERILKLIDL SDKPEAHGRS TERFRELLIS LAKDSNAPGA AGTTVSSSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run ste13 No Comments Unpublished Data

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] deduced N/A No confident structure predictions are available.
    2 View Details [102..229] PSI-BLAST 15.522879 Clathrin D6 Coat


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle