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Protein Overview: cdt2

General Information:
Name(s) found: cdt2 / SPAC17H9.19c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • WD repeat protein Cdt2 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 490 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Cul4A-RING ubiquitin ligase complex [IDALink to PubMed article]
    signalosome [IPILink to PubMed article]
    Biological Process: ascospore formation [IMPLink to PubMed article]
    DNA damage checkpoint [IGILink to PubMed article]
    DNA replication checkpoint [IGILink to PubMed article]
    positive regulation of ubiquitin-protein ligase activity [IMPLink to PubMed article]
    DNA-dependent DNA replication [IGILink to PubMed article][IMPLink to PubMed article]
    response to DNA damage stimulus [IMPLink to PubMed article]
    cellular protein localization [IGILink to PubMed article]
    protein ubiquitination during ubiquitin-dependent protein catabolic process [IMPLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]
    protein complex binding [IPILink to PubMed article]
    protein binding, bridging [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMDIGKALS DVGGLRDITS RANNSLPPTP DSSPAAPSKK HKLYDFLESR GKIETPRKRI  60
   61 VFEKKPLLHK PVHIQKKPAQ LCKELLIRQL GGSRSHPFST KTSRHVGGRL NLETYYSRPS 120
  121 ECLMMLNQLP FCLGFANNES LLAVCTETGA LELFDSRFYD RQNEENQPSA RRIHGWLAHN 180
  181 NAIFSVNFSK DDSLLATSSG DQTSKVFDLS TQQCITRLGR RGVDGYHSHS VKQVNFCNDS 240
  241 PYNLVSCSRD GSIIFWDMRT HGITIDGEHF QKPVLRIRKA HENSGRDCSI TSATWLPQST 300
  301 SQVISSCSAN SALKLWDLRT VHTVRPLPAA TTPELTTSKR DFGVTNVCTS PDGERIYAAS 360
  361 RDSIIYEYSS RHLNSGFCKT YKDPRLRISS FYVKLACSPD GATLACGGGV QDKTSGVVVF 420
  421 DTTRNCSSSA MLTGGHTKDV TAVDWSSEGQ LASISDDGSV RVWNSSLHGS AANLREKNFS 480
  481 EIFYWGFSEK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..421] PSI-BLAST 43.39794 No description for 2gnqA was found.
    2 View Details [422..490] PSI-BLAST 34.154902 Cdc4 F-box and linker domains; Cdc4 propeller domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle