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Protein Overview: arc15

General Information:
Name(s) found: arc15 / SPAC17G8.04c [Sanger Pombe]
Description(s) found:
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  • pir||T37856 probable arp2/3 complex 16 kd subunit - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|197305156|pdb|3DWL|L Chain L, Crystal Structure Of Fission Yeast Arp23 COMPLEX LACKING The Arp2 Subunit [NCBI NR]
  • gi|197305150|pdb|3DWL|G Chain G, Crystal Structure Of Fission Yeast Arp23 COMPLEX LACKING The Arp2 Subunit [NCBI NR]
  • gi|19114639|ref|NP_593727.1| ARP2/3 actin-organizing complex subunit Arc15 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|1723477|sp|Q10316.1|ARPC5_SCHPO RecName: Full=Actin-related protein 2/3 complex subunit 5; AltName: Full=Arp2/3 complex 16 kDa subunit; Short=p16-ARC [NCBI NR]
  • gi|1213253|emb|CAA93687.1| ARP2/3 actin-organizing complex subunit Arc5 [Schizosaccharomyces pombe] [NCBI NR]
  • ARP2/3 actin-organizing complex subunit Arc15 [Sanger Pombe]
  • Actin-related protein 2/3 complex subunit 5 OS=Schizosaccharomyces pombe GN=arc5 PE=1 SV=1 [Swiss-Prot]
  • (Q10316) Probable ARP2/3 complex 16 kDa subunit (p16-ARC) [Swiss-Prot]
  • ARP2/3 ACTIN-ORGANIZING COMPLEX; INVOLVED IN ACTIN ASSEMBLY AND FUNCTION; SIMILAR TO S. CEREVISIAE ARC15: Q10316; [pompepVF.fasta]
  • COMPONENT OF THE ARP2/3 ACTIN-ORGANIZING COMPLEX; INVOLVED IN ACTIN ASSEMBLY AND FUNCTION: Q10316; [pompepV13]
  • Probable ARP2/3 complex 16 kDa subunit (P16-ARC) [pompep4896]
  • |||ARP2/3 actin-organizing complex [pompepnew.fasta]
  • Probable ARP2/3 complex 16 kDa subunit (p16-ARC) [4896.FASTAC]
  • |arc5|arc16|ARP2/3 actin-organizing complex|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • putative arp2/3 complex 16 kd subunit [Schizosaccharomyces pombe]gi|1213253|emb|CAA93687.1| SPAC17G8.04c [Schizosaccharomyces pombe]gi|1723477|sp|Q10316|AR16_SCHPO Probable ARP2/3 complex 16 kDa subunit (p16-ARC)gi|7492406|pir||T37856 probable arp2/3 c [nrdb_11152004_Chlamydomonas]
  • |arc5|arc16|ARP2/3 actin-organizing complex Arc16p subunit|Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (Q10316) Probable ARP2/3 complex 16 kDa subunit (P16-ARC) [pompep4896_normal_reversed]
  • |arc5|arc15|ARP2/3 actin-organizing complex subunit Arc5|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • ARP2/3 complex 16 kDa subunit (p16-ARC) [nr-271106-contam.fasta]
  • SPAC17G8.04c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAC17G8.04c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Actin-related protein 2/3 complex subunit 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=arc5 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 152 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    actomyosin contractile ring [IDALink to PubMed article]
    medial cortex [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    actin cortical patch [IDALink to PubMed article]
    Arp2/3 protein complex [IDALink to PubMed article]
    Biological Process: Arp2/3 complex-mediated actin nucleation [IDALink to PubMed article]
    actin cortical patch assembly [ICLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFRTLDVDS ITEPVLTEQD IFPIRNETAE QVQAAVSQLI PQARSAIQTG NALQGLKTLL  60
   61 SYVPYGNDVQ EVRTQYLNAF VDVLSNIRAA DIPAFVKECS TEEIDNIVNF IYRGLANPQA 120
  121 YNSSVLLNWH EKVVEISGIG CIVRVLNSRP DL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..152] PSI-BLAST 57.30103 Arp2/3 complex 16 kDa subunit ARPC5

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • actin binding
    		•  4.05206194993572 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  2.8232927372914 bayes_pls_golite062009
  • binding
    		•  2.61919369153094 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  1.81816151576197 bayes_pls_golite062009
  • structural molecule activity
    		•  1.11205059538724 bayes_pls_golite062009
  • protein binding
    		•  0.604512822275397 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle