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Protein Overview: FBpp0310500, Sha...

General Information:
Name(s) found: FBpp0310500 [FlyBase]
Shawn-PD / FBpp0074508 [FlyBase]
Shawn-PC / FBpp0074507 [FlyBase]
Shawn-PB / FBpp0074506 [FlyBase]
Description(s) found:
Found 52 descriptions.
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  • type=protein; loc=X:join(19508008..19508176,19508246..19508415,19508475..19508984,19509057..19509138,19509217..19509449); ID=FBpp0310500; name=Shawn-PE; parent=FBgn0031039,FBtr0344069; dbxref=FlyBase:FBpp0310500,FlyBase_Annotation_IDs:CG14209-PE; MD5=b0a74183d4f83033e3752a6f80afdab4; length=387; release=r5.56; species=Dmel; [FlyBase]
  • The gene Shawn is referred to in FlyBase by the symbol Dmel\Shawn (CG14209, FBgn0031039). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:19505559..19509647. It has the cytological map location 18D3. Based on sequence similarity, it is predicted to have molecular function</span>: transmembrane transporter activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: transport. No alleles are reported. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • The gene Shawn is referred to in FlyBase by the symbol Dmel\Shawn (CG14209, FBgn0031039). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:19505559..19509647. It has the cytological map location 18D3. Based on sequence similarity, it is predicted to have molecular function</span>: transmembrane transporter activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: transport. No alleles are reported. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • The gene Shawn is referred to in FlyBase by the symbol Dmel\Shawn (CG14209, FBgn0031039). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:19505559..19509647. It has the cytological map location 18D3. Based on sequence similarity, it is predicted to have molecular function</span>: transmembrane transporter activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: transport. No alleles are reported. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 387 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [ISS]
    mitochondrial envelope [ISS]
    mitochondrial inner membrane [ISS]
    Biological Process: transmembrane transport [IEA]
    transport [ISS]
    Molecular Function: transmembrane transporter activity [ISS]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATREACGQF AAASAAMAAA SSQNPSKATM TDPRFRIRPL QQVASACTGA MVTACFMTPL  60
   61 DVIKTRLQAQ QQALLSNKCF LYCNGLMDHI CPCGPDTPNP AAAKPAPRFS GTIDAFIKIS 120
  121 RTEGIGSLWS GLSPTLISAL PSTIIYFVAY EQFKARFTDI HYKYTRRPDT IAHDIPHPIP 180
  181 FLVPLLAGVS GRILAVTCVS PVELIRTKMQ SQRMTHAEMF GTIRQVVQSQ GVLGLWRGLP 240
  241 PTILRDVPFS GIYWTCYEYL KSSFGVVEPT FSFSFAAGAI SGSVAATITT PFDVVKTHEQ 300
  301 IEFGEKFIFS DNPPKQVATK SVAMRLASIY RMGGVPAIFS GLGPRLFKVA PACAIMISSF 360
  361 EYGKSFFYHY NIDQHNRSNQ ATKGPGS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..387] PSI-BLAST 69.522879 structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle