YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0310500, Sha...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATREACGQF AAASAAMAAA SSQNPSKATM TDPRFRIRPL QQVASACTGA MVTACFMTPL  60
   61 DVIKTRLQAQ QQALLSNKCF LYCNGLMDHI CPCGPDTPNP AAAKPAPRFS GTIDAFIKIS 120
  121 RTEGIGSLWS GLSPTLISAL PSTIIYFVAY EQFKARFTDI HYKYTRRPDT IAHDIPHPIP 180
  181 FLVPLLAGVS GRILAVTCVS PVELIRTKMQ SQRMTHAEMF GTIRQVVQSQ GVLGLWRGLP 240
  241 PTILRDVPFS GIYWTCYEYL KSSFGVVEPT FSFSFAAGAI SGSVAATITT PFDVVKTHEQ 300
  301 IEFGEKFIFS DNPPKQVATK SVAMRLASIY RMGGVPAIFS GLGPRLFKVA PACAIMISSF 360
  361 EYGKSFFYHY NIDQHNRSNQ ATKGPGS

Type	Start	End	Confidence
Signal Peptide	1	22	0.85
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	387	0.76