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View Structure Prediction Details

Protein: FBpp0310500, Sha...
Organism: Drosophila melanogaster
Length: 387 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0310500, Sha....

Description E-value Query
Range
Subject
Range
CG2616-PA, FBpp0... - This gene is referred to in FlyBase by the symbol Dmel\CG2616 (CG2616, FBgn0037512). It is a protein...
gi|220955374, gi... - gi|220955374|gb|ACL90230.1| CG2616-PA [synthetic construct], gi|220945486|gb|ACL85286.1| CG2616-PA [...
293.0 [0..22] [376..73]

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Predicted Domain #1
Region A:
Residues: [1-387]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATREACGQF AAASAAMAAA SSQNPSKATM TDPRFRIRPL QQVASACTGA MVTACFMTPL  60
   61 DVIKTRLQAQ QQALLSNKCF LYCNGLMDHI CPCGPDTPNP AAAKPAPRFS GTIDAFIKIS 120
  121 RTEGIGSLWS GLSPTLISAL PSTIIYFVAY EQFKARFTDI HYKYTRRPDT IAHDIPHPIP 180
  181 FLVPLLAGVS GRILAVTCVS PVELIRTKMQ SQRMTHAEMF GTIRQVVQSQ GVLGLWRGLP 240
  241 PTILRDVPFS GIYWTCYEYL KSSFGVVEPT FSFSFAAGAI SGSVAATITT PFDVVKTHEQ 300
  301 IEFGEKFIFS DNPPKQVATK SVAMRLASIY RMGGVPAIFS GLGPRLFKVA PACAIMISSF 360
  361 EYGKSFFYHY NIDQHNRSNQ ATKGPGS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.522879
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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