YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Arp8-PA

General Information:
Name(s) found: Arp8-PA / FBpp0074318 [FlyBase]
Description(s) found:
Found 22 descriptions.
SHOW ALL
  • The gene Actin-related protein 8 is referred to in FlyBase by the symbol Dmel\Arp8 (CG7846, FBgn0030877). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:17752402..17754840. It has the cytological map location 16E2. It is reported to have molecular function</span>: structural constituent of cytoskeleton. It is reported to be involved in the biological process</span>: cytoskeleton organization. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 607 amino acids

    Gene Ontology:
    Cellular Component: Ino80 complex [IDA]
    actin filament [NAS]
    Biological Process: cytoskeleton organization [NAS]
    Molecular Function: protein binding [IEA]
    structural constituent of cytoskeleton [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRSRASSTS SGRHPAPPPI GLPQPQAQPL EAPKIIVIHP GSQHLRIGRA ADLNPLTLLH  60
   61 AVAYRRRPGA SDRPHHDPLL PPLDNVNSNS GLMVEFEEQR LVVSRILQHC VVDNKNRLRV 120
  121 ATPPQQLAHF NRSSQAEKVP APSGQMADEP WLDREAPVLF DDRILRLGAV DARNYDIHFP 180
  181 IQRGELNVHN EKGGSLQASM QHLERIWSYA LEERLKIPLR KLGTHCAVLV VNDVYVRRHL 240
  241 REFVTLLLRR LGFRRCFLVQ DSVASTFGAG IGYGCVVDIG AQKTSIACIE DGISQLDARV 300
  301 RLSYGGGDLD QVLLLLLRKC GFPYRECNVQ ESYVDAHLLD ELKEKFCHLN ASVCGAQEKH 360
  361 FNLRKHNGQW LRYTIQVGDE ALMAPLALFH TELLNITGRT KAVFTQQAVQ DQYDCEDCFD 420
  421 AEYLKETGRK NGVRGGDILQ LSTSAGYQPR PQLPVTADDE ELIVVDQDET ISNCQSQLGA 480
  481 QTAGGQMNSN GCYHNGQGLV LPLDQAIIQS INRLSSYETK RKMFGSILLV GSSAKLPGLA 540
  541 AWLEQRISQQ VQSEVNVLIK GMDAGMVAWK GAAIMSVLES ARELWISQND WQRHGLRVLR 600
  601 ERSPFLW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] deduced N/A No confident structure predictions are available.
    2 View Details [117..508] PSI-BLAST 145.0 No description for 2oanA was found.
    3 View Details [509..607] FFAS03 4.67 Actin-related protein 3, Arp3

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of cytoskeleton
    		•  3.14961582364442 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  3.11425505645918 bayes_pls_golite062009
  • actin binding
    		•  2.955791490673 bayes_pls_golite062009
  • binding
    		•  2.11855816699924 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.09111975841662 bayes_pls_golite062009
  • DNA helicase activity
    		•  1.95284371697518 bayes_pls_golite062009
  • DNA binding
    		•  1.70014394990425 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
    		•  1.59975673209166 bayes_pls_golite062009
  • histone acetyltransferase activity
    		•  1.59975673209166 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.53796369834496 bayes_pls_golite062009
  • actin filament binding
    		•  1.46443668299938 bayes_pls_golite062009
  • myosin binding
    		•  1.13621903736628 bayes_pls_golite062009
  • transcription factor activity
    		•  1.06678984888387 bayes_pls_golite062009
  • structural molecule activity
    		•  0.998075030492697 bayes_pls_golite062009
  • protein binding
    		•  0.956664772028256 bayes_pls_golite062009
  • kinase activity
    		•  0.650790710321692 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.575595567012379 bayes_pls_golite062009
  • nucleosome binding
    		•  0.329990231856661 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.324655711623803 bayes_pls_golite062009
  • catalytic activity
    		•  0.296484721581333 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
    		•  0.236498546608508 bayes_pls_golite062009
  • carbohydrate kinase activity
    		•  0.123282448317819 bayes_pls_golite062009
  • transferase activity
    		•  0.105619024604158 bayes_pls_golite062009
  • N-acetyltransferase activity
    		•  0.0571907728331915 bayes_pls_golite062009
  • transcription activator activity
    		•  0.0275592755061818 bayes_pls_golite062009
  • 5'-3' DNA helicase activity
    		•  0.0183211661451317 bayes_pls_golite062009
  • ATP-dependent 5'-3' DNA helicase activity
    		•  0.0183211661451317 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle