| Protein: | Arp8-PA |
| Organism: | Drosophila melanogaster |
| Length: | 607 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Arp8-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
515.0 | [0..102] | [500..1] |
|
Region A: Residues: [1-116] |
1 11 21 31 41 51
| | | | | |
1 MQRSRASSTS SGRHPAPPPI GLPQPQAQPL EAPKIIVIHP GSQHLRIGRA ADLNPLTLLH 60
61 AVAYRRRPGA SDRPHHDPLL PPLDNVNSNS GLMVEFEEQR LVVSRILQHC VVDNKN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [117-508] |
1 11 21 31 41 51
| | | | | |
1 RLRVATPPQQ LAHFNRSSQA EKVPAPSGQM ADEPWLDREA PVLFDDRILR LGAVDARNYD 60
61 IHFPIQRGEL NVHNEKGGSL QASMQHLERI WSYALEERLK IPLRKLGTHC AVLVVNDVYV 120
121 RRHLREFVTL LLRRLGFRRC FLVQDSVAST FGAGIGYGCV VDIGAQKTSI ACIEDGISQL 180
181 DARVRLSYGG GDLDQVLLLL LRKCGFPYRE CNVQESYVDA HLLDELKEKF CHLNASVCGA 240
241 QEKHFNLRKH NGQWLRYTIQ VGDEALMAPL ALFHTELLNI TGRTKAVFTQ QAVQDQYDCE 300
301 DCFDAEYLKE TGRKNGVRGG DILQLSTSAG YQPRPQLPVT ADDEELIVVD QDETISNCQS 360
361 QLGAQTAGGQ MNSNGCYHNG QGLVLPLDQA II
|
| Detection Method: | |
| Confidence: | 145.0 |
| Match: | 2oanA |
| Description: | No description for 2oanA was found. |
| Term | Confidence | Notes |
| structural constituent of cytoskeleton | 3.14961582364442 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.11425505645918 | bayes_pls_golite062009 |
| actin binding | 2.955791490673 | bayes_pls_golite062009 |
| binding | 2.11855816699924 | bayes_pls_golite062009 |
| transcription regulator activity | 2.09111975841662 | bayes_pls_golite062009 |
| DNA helicase activity | 1.95284371697518 | bayes_pls_golite062009 |
| DNA binding | 1.70014394990425 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 1.59975673209166 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 1.59975673209166 | bayes_pls_golite062009 |
| nucleic acid binding | 1.53796369834496 | bayes_pls_golite062009 |
| actin filament binding | 1.46443668299938 | bayes_pls_golite062009 |
| myosin binding | 1.13621903736628 | bayes_pls_golite062009 |
| transcription factor activity | 1.06678984888387 | bayes_pls_golite062009 |
| structural molecule activity | 0.998075030492697 | bayes_pls_golite062009 |
| protein binding | 0.956664772028256 | bayes_pls_golite062009 |
| kinase activity | 0.650790710321692 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.575595567012379 | bayes_pls_golite062009 |
| nucleosome binding | 0.329990231856661 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.324655711623803 | bayes_pls_golite062009 |
| catalytic activity | 0.296484721581333 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.236498546608508 | bayes_pls_golite062009 |
| carbohydrate kinase activity | 0.123282448317819 | bayes_pls_golite062009 |
| transferase activity | 0.105619024604158 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 0.0571907728331915 | bayes_pls_golite062009 |
| transcription activator activity | 0.0275592755061818 | bayes_pls_golite062009 |
| 5'-3' DNA helicase activity | 0.0183211661451317 | bayes_pls_golite062009 |
| ATP-dependent 5'-3' DNA helicase activity | 0.0183211661451317 | bayes_pls_golite062009 |
|
Region A: Residues: [509-607] |
1 11 21 31 41 51
| | | | | |
1 QSINRLSSYE TKRKMFGSIL LVGSSAKLPG LAAWLEQRIS QQVQSEVNVL IKGMDAGMVA 60
61 WKGAAIMSVL ESARELWISQ NDWQRHGLRV LRERSPFLW
|
| Detection Method: | |
| Confidence: | 4.67 |
| Match: | 1k8kA |
| Description: | Actin-related protein 3, Arp3 |
Matching Structure (courtesy of the PDB): |
|
