Protein Overview: SmG-PA, SmG-PB

General Information:
Name(s) found:	SmG-PB / FBpp0111906 [FlyBase] SmG-PA / FBpp0074151 [FlyBase]
Description(s) found: Found 34 descriptions. SHOW ALL	The gene Small ribonucleoprotein G is referred to in FlyBase by the symbol Dmel\SmG (CG9742, FBgn0030765). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:16533832..16534447. It has the cytological map location 14F4. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: mitotic spindle organization. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase] The gene Small ribonucleoprotein G is referred to in FlyBase by the symbol Dmel\SmG (CG9742, FBgn0030765). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:16533832..16534447. It has the cytological map location 14F4. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: mitotic spindle organization. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
Organism:	Drosophila melanogaster
Length:	76 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA] catalytic step 2 spliceosome [IDA] precatalytic spliceosome [IDA] spliceosomal complex [ISS] small nuclear ribonucleoprotein complex [IDA][ISS]
Biological Process:	mitotic spindle organization [IMP] spliceosome assembly [ISS] nuclear mRNA splicing, via spliceosome [IC][ISS]
Molecular Function:	NONE FOUND

Sequence:
Sequence: [PDR BLAST] [ProtParam]	1 11 21 31 41 51 \| \| \| \| \| \| 1 MSKAHPPEVK KYMDKRMMLK LNGGRAVTGI LRGFDPFMNV VLDDTVEECK DNTKNNIGMV 60 61 VIRGNSIVMV EALDRV

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

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No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..76]	PSI-BLAST	16.69897	B core SNRNP protein

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
	9.36615441177233	bayes_pls_golite062009
RNA binding	5.81718051012035	bayes_pls_golite062009
nucleic acid binding	2.69031444148163	bayes_pls_golite062009
mRNA binding	2.57166143288861	bayes_pls_golite062009
binding	2.44117021254507	bayes_pls_golite062009
protein binding	0.318488892917007	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.94

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle