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Protein Overview: nonA-PA, FBpp0309274

General Information:
Name(s) found: FBpp0309274 [FlyBase]
nonA-PA / FBpp0074011 [FlyBase]
Description(s) found:
Found 28 descriptions.
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  • type=protein; loc=X:join(16255731..16256087,16257391..16258663,16259238..16259546,16259620..16259675,16260937..16261044); ID=FBpp0309274; name=nonA-PD; parent=FBgn0004227,FBtr0340313; dbxref=FlyBase:FBpp0309274,FlyBase_Annotation_IDs:CG4211-PD; MD5=3db46fb606889bf3705432380be6276e; length=700; release=r5.56; species=Dmel; [FlyBase]
  • The gene no on or off transient A is referred to in FlyBase by the symbol Dmel\nonA (CG4211, FBgn0004227). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:16255566..16265580. It has the cytological map location 14B18-14C1. Based on sequence similarity, it is predicted to have molecular function</span>: poly-pyrimidine tract binding; mRNA binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: nuclear mRNA splicing, via spliceosome. 39 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 700 amino acids

    Gene Ontology:
    Cellular Component: catalytic step 2 spliceosome [IDA]
    precatalytic spliceosome [IDA]
    spliceosomal complex [ISS]
    Biological Process: phototaxis [NAS]
    male courtship behavior, veined wing generated song production [NAS][TAS]
    visual perception [NAS][TAS]
    visual behavior [NAS]
    nuclear mRNA splicing, via spliceosome [IC][ISS]
    Molecular Function: nucleotide binding [IEA]
    poly-pyrimidine tract binding [ISS]
    mRNA binding [ISS][NAS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESAGKQDNN ATQQLPQRQQ RGNQQANKNL GKHNAQKQND SADGGPAEKK QRFGGPNAQN  60
   61 QNQNQNQNGG VTGGGGAVGG PNQNKNFGNN KGGFVGNRNR NNNRAGNQNR TFPGNNNPNQ 120
  121 KPNNETSKAD GPNALAKNNE PATAAAGQNQ ANQNANKGQN QRQGQNQNQN QVHGQGNQGG 180
  181 PGNQGGAGNQ GGQGNQGGAG NQGNGQGFRG RNAGNNQGGG FSGGPQNQQR DNRNRSGPRP 240
  241 GGGAGGAMNS TNMGGGGGGG GGGGPRGGED FFITQRLRSI SGPTFELEPV EVPTETKFSG 300
  301 RNRLYVGNLT NDITDDELRE MFKPYGEISE IFSNLDKNFT FLKVDYHPNA EKAKRALDGS 360
  361 MRKGRQLRVR FAPNATILRV SNLTPFVSNE LLYKSFEIFG PIERASITVD DRGKHMGEGI 420
  421 VEFAKKSSAS ACLRMCNEKC FFLTASLRPC LVDPMEVNDD TDGLPEKAFN KKMPDFNQER 480
  481 SIGPRFADPN SFEHEYGSRW KQLHNLFKTK QDALKRELKM EEDKLEAQME YARYEQETEL 540
  541 LRQELRKREV DNERKKLEWE MREKQAEEMR KREEETMRRH QTEMQSHMNR QEEDMLRRQQ 600
  601 ETLFMKAQQL NSLLDQQEGF GGGGGGNNST FDNFAGNSNS PFEVFRGNNN NNSTMIGNNA 660
  661 APNTQDSFAF EFGVNNMNQG GNQRGNNGGG NNVPWGRRRF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..291] PSI-BLAST 33.69897 No description for 1y0fB was found.
    2 View Details [292..375] PSI-BLAST 12.522879 Solution structure of the N-terminal RNA recognition motif of NonO
    3 View Details [376..452] FFAS03 4.08 No description for 2dnoA was found.
    4 View Details [453..622] PSI-BLAST 10.522879 No description for 2i1jA was found.
    5 View Details [623..700] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle