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Protein Overview: FBpp0310125, FBp...

General Information:
Name(s) found: FBpp0310125 [FlyBase]
FBpp0300995 [FlyBase]
FBpp0292386 [FlyBase]
CG9009-PA / FBpp0073789 [FlyBase]
Description(s) found:
Found 38 descriptions.
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  • type=protein; loc=X:complement(14828663..14829305,14829364..14829478,14829909..14830451,14840304..14840514,14844351..14844632); ID=FBpp0310125; name=pdgy-PD; parent=FBgn0027601,FBtr0343521; dbxref=FlyBase:FBpp0310125,FlyBase_Annotation_IDs:CG9009-PD; MD5=b433da63faf8cd38acac39f6f0d3fc89; length=597; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=X:complement(14828663..14829305,14829364..14829478,14829909..14830451,14840304..14840514,14844351..14844632); ID=FBpp0300995; name=pdgy-PC; parent=FBgn0027601,FBtr0308838; dbxref=FlyBase:FBpp0300995,FlyBase_Annotation_IDs:CG9009-PC,REFSEQ:NP_001245673,GB_protein:AFH07387; MD5=b433da63faf8cd38acac39f6f0d3fc89; length=597; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=X:complement(14828663..14829305,14829364..14829478,14829909..14830451,14840304..14840514,14844351..14844632); ID=FBpp0292386; name=pdgy-PB; parent=FBgn0027601,FBtr0303294; dbxref=FlyBase:FBpp0292386,FlyBase_Annotation_IDs:CG9009-PB,REFSEQ:NP_001188590,GB_protein:ADV37672; MD5=b433da63faf8cd38acac39f6f0d3fc89; length=597; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG9009 (CG9009, FBgn0027601). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:14828067..14844771. It has the cytological map location 13A1. Based on sequence similarity, it is predicted to have molecular function</span>: long-chain-fatty-acid-CoA ligase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: metabolic process. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 597 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEA]
    Molecular Function: long-chain fatty acid-CoA ligase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPAAQLLRM RSATAFGSAA TRSITTNRRQ RTTSTASAQR ERTQSVSETD KFLHYSPEDG  60
   61 YYKTSPFDPV TIPNVPLHEY VWRDFKKWER RTAAVCVITD RQYTFAQMRD ASAAFAVRLQ 120
  121 TKFNLQKPDV LAICLPNLPE YPIATLGAIE AGLTVTTVNP VYTPDEIARQ LTFSGAKFLV 180
  181 GTVSGFATLS QASKLVGRQI PIAVVRTSAE EALPEGAIDF SELTSTQNVR YEDLKAPKEA 240
  241 SADDMVFLPF SSGTTGLPKG VMLSHNNITS NCEQVQASLP LDLMGPQNTL PGVLPFFHIY 300
  301 GLTVVMLSKL GQGCRLATMP CFKPDDFMRS LDKYQGSILN LVPPIALFMI NHPKLTQETA 360
  361 PHLKVVMSGA APIGQHDVER FLNKFPNTVF KQGYGMTEAS PVVLLTPEGN KVYASTGVLP 420
  421 ASTEAKIVPL DGSDAKGVGP RTTGELCVRG PQVMAGYLNN DEANQVTFYP GNWLRSGDVA 480
  481 FYDEDGLFYI TDRMKELIKV KGFQVPPAEL EAVLRDHPKI LEAAVFGIPH EFNGEAPRAI 540
  541 VVLRQGEKAS AEEISAYVAE RVAHYKKLEG GVIFVDEVPK NPTGKILRRE LKEKFSD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..597] PSI-BLAST 114.0 FIREFLY LUCIFERASE IN COMPLEX WITH BROMOFORM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity, forming carbon-sulfur bonds
    		•  5.10123876514454 bayes_pls_golite062009
  • fatty acid ligase activity
    		•  4.83067429373059 bayes_pls_golite062009
  • long-chain fatty acid-CoA ligase activity
    		•  4.72692389032116 bayes_pls_golite062009
  • acid-thiol ligase activity
    		•  4.28278725989432 bayes_pls_golite062009
  • CoA-ligase activity
    		•  4.12850865352867 bayes_pls_golite062009
  • acetate-CoA ligase activity
    		•  3.83959707137518 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)
    		•  2.74744781333102 bayes_pls_golite062009
  • Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity
    		•  2.74744781333102 bayes_pls_golite062009
  • luciferin monooxygenase activity
    		•  2.67396462766343 bayes_pls_golite062009
  • ligase activity
    		•  2.49556073715112 bayes_pls_golite062009
  • catalytic activity
    		•  1.83545185797733 bayes_pls_golite062009
  • binding
    		•  0.903437109563498 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  0.464663038956639 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.245590924269919 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.52

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle