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Protein Overview: FBpp0308688, Chr...

General Information:
Name(s) found: FBpp0308688 [FlyBase]
Chrac-16-PA / FBpp0073475 [FlyBase]
Description(s) found:
Found 35 descriptions.
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  • type=protein; loc=X:complement(11911484..11911906); ID=FBpp0308688; name=Chrac-16-PB; parent=FBgn0043001,FBtr0339625; dbxref=FlyBase:FBpp0308688,FlyBase_Annotation_IDs:CG15736-PB; MD5=cc7f102992c735c3f3bfecad1c162a06; length=140; release=r5.56; species=Dmel; [FlyBase]
  • The gene Chrac-16 is referred to in FlyBase by the symbol Dmel\Chrac-16 (CG15736, FBgn0043001). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:11911307..11911989. It has the cytological map location 11A1. There is experimental evidence that it has the molecular function</span>: protein heterodimerization activity. There is experimental evidence that it is involved in the biological process</span>: cellular response to DNA damage stimulus. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 140 amino acids

    Gene Ontology:
    Cellular Component: chromatin accessibility complex [IDA][NAS]
    Biological Process: response to DNA damage stimulus [IMP]
    Molecular Function: protein heterodimerization activity [IPI]
    sequence-specific DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEPRSQPPV ERPPTAETFL PLSRVRTIMK SSMDTGLITN EVLFLMTKCT ELFVRHLAGA  60
   61 AYTEEFGQRP GEALKYEHLS QVVNKNKNLE FLLQIVPQKI RVHQFQEMLR LNRSAGSDDD 120
  121 DDDDDDDDEE ESESESESDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] PSI-BLAST 22.39794 Histone fold heterodimer of the Chromatin Accessibility Complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.581886805340955 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle