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View Structure Prediction Details

Protein: FBpp0308688, Chr...
Organism: Drosophila melanogaster
Length: 140 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0308688, Chr....

Description E-value Query
Range		 Subject
Range
gi|68432331 - gi|68432331|ref|XP_690287.1| PREDICTED: similar to ReO_6 [Danio rerio]
 160.0 [0..2] [120..295]
gi|73955042 - gi|73955042|ref|XP_853256.1| PREDICTED: similar to Histone H2A.x (H2a/x) [Canis familiaris]
 153.0 [0..2] [133..107]
gi|94395136 - gi|94395136|ref|XP_997178.1| PREDICTED: similar to H2A histone family, member O [Mus musculus]
 152.0 [0..2] [123..27]
gi|76612869 - gi|76612869|ref|XP_871733.1| PREDICTED: similar to histone H2A [Bos taurus]
 151.0 [0..2] [123..68]
gi|631691 - pir||S45110 histone H2A - mouse
gi|817939 - gi|817939|emb|CAA83210.1| histone H2A [Mus musculus domesticus]
 147.0 [0..2] [123..15]

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Predicted Domain #1
Region A:
Residues: [1-140] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEPRSQPPV ERPPTAETFL PLSRVRTIMK SSMDTGLITN EVLFLMTKCT ELFVRHLAGA  60
   61 AYTEEFGQRP GEALKYEHLS QVVNKNKNLE FLLQIVPQKI RVHQFQEMLR LNRSAGSDDD 120
  121 DDDDDDDDEE ESESESESDE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.39794
Match: 2bykA
Description: Histone fold heterodimer of the Chromatin Accessibility Complex
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.581886805340955 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle