YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: FBpp0300658, Tre1-PA

General Information:
Name(s) found: FBpp0300658 [FlyBase]
Tre1-PA / FBpp0070813 [FlyBase]
Description(s) found:
Found 32 descriptions.
SHOW ALL
  • type=protein; loc=X:complement(5567999..5568185,5568255..5568742,5568804..5568906,5568973..5569073,5569145..5569290,5569363..5569516); ID=FBpp0300658; name=Tre1-PB; parent=FBgn0046687,FBtr0308339; dbxref=FlyBase:FBpp0300658,FlyBase_Annotation_IDs:CG3171-PB,REFSEQ:NP_001245534,GB_protein:AFH07248; MD5=fdac5e78420ad51712756a03776d4a2c; length=392; release=r5.56; species=Dmel; [FlyBase]
  • The gene trapped in endoderm-1 is referred to in FlyBase by the symbol Dmel\Tre1 (CG3171, FBgn0046687). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:5567869..5574008. It has the cytological map location 5A11-5A12. There is experimental evidence that it has the molecular function</span>: taste receptor activity. There is experimental evidence that it is involved in the biological process</span>: sensory perception of sweet taste; germ cell migration; germ cell development; sensory perception of taste. 29 alleles are reported. The phenotypes of these alleles are annotated with: eye; macrochaeta; gonad; wing. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 392 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA][ISS][NAS]
    Biological Process: germ cell development [IMP]
    sensory perception of taste [IMP][NAS]
    germ cell programmed cell death [TAS]
    pole cell migration [TAS]
    G-protein coupled receptor protein signaling pathway [IEA][ISS]
    sensory perception of sweet taste [IMP]
    germ cell migration [IMP][TAS]
    Molecular Function: G-protein coupled receptor activity [ISS]
    taste receptor activity [IMP][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQDMGMATG YFQDADMQMD EPAAATQSIY PHSATLFAAI SACVFVTIGV LGNLITLLAL  60
   61 LKSPTIREHA TTAFVISLSI SDLLFCSFSL PLTAVRFFQE SWTFGTTLCK IFPVIFYGNV 120
  121 AVSLLSMVGI TLNRYILIAC HSRYSQIYKP KFITLQLLFV WAVSFLLLLP PILGIWGEMG 180
  181 LDEATFSCTI LKKEGRSIKK TLFVIGFLLP CLVIIVSYSC IYITVLHQKK KIRNHDNFQI 240
  241 AAAKGSSSSG GGSYMTTTCT RKAREDNRLT VMMVTIFLCF LVCFLPLMLA NVVDDERNTS 300
  301 YPWLHIIASV MAWASSVINP IIYAASNRNY RVAYYKIFAL LKFWGEPLSP MPSRNYHQSK 360
  361 NSKELSGVIR STPLFHAVQK NSINQMCQTY SV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..392] PSI-BLAST 36.045757 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle