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Protein Overview: Vha100-1-PG

General Information:
Name(s) found: Vha100-1-PG / FBpp0084746 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • The gene Vha100-1 is referred to in FlyBase by the symbol Dmel\Vha100-1 (CG1709, FBgn0028671). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:24956772..24963702. It has the cytological map location 98F12. There is experimental evidence that it has the molecular function</span>: calmodulin binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: ATP synthesis coupled proton transport. 10 alleles are reported. No phenotypic data is available. It has 10 annotated transcripts and 10 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 850 amino acids

    Gene Ontology:
    Cellular Component: vacuolar proton-transporting V-type ATPase, V0 domain [ISS]
    synapse [IDA]
    Biological Process: ATP synthesis coupled proton transport [IEA]
    Molecular Function: calmodulin binding [IDA]
    hydrogen-exporting ATPase activity, phosphorylative mechanism [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLFRSEEM ALCQLFLQSE AAYACVSELG ELGLVQFRDL NPDVNAFQRK FVNEVRRCDE  60
   61 MERKLRYLEK EIKKDGIPML DTGESPEAPQ PREMIDLEAT FEKLENELRE VNQNAEALKR 120
  121 NFLELTELKH ILRKTQVFFD EQEGGVNQTT ESMTRALITD EARTAGASMG PVQLGYMEKS 180
  181 NEREDYLPCF VAGVILRERL PAFERMLWRA CRGNVFLRQA MIETPLEDPT NGDQVHKSVF 240
  241 IIFFQGDQLK TRVKKICEGF RATLYPCPEA PADRREMAMG VMTRIEDLNT VLGQTQDHRH 300
  301 RVLVAAAKNL KNWFVKVRKI KAIYHTLNLF NLDVTQKCLI AECWVPLLDI ETIQLALRRG 360
  361 TERSGSSVPP ILNRMQTFEN PPTYNRTNKF TKAFQALIDA YGVASYREMN PAPYTIITFP 420
  421 FLFAVMFGDL GHGAIMALFG LWMIRKEKGL AAQKTDNEIW NIFFGGRYII FLMGVFSMYT 480
  481 GLIYNDIFSK SLNIFGSHWH LSYNKSTVME NKFLQLSPKG DYEGAPYPFG MDPIWQVAGA 540
  541 NKIIFHNAYK MKISIIFGVI HMIFGVVMSW HNHTYFRNRI SLLYEFIPQL VFLLLLFFYM 600
  601 VLLMFIKWIK FAATNDKPYS EACAPSILIT FIDMVLFNTP KPPPENCETY MFMGQHFIQV 660
  661 LFVLVAVGCI PVMLLAKPLL IMQARKQANV QPIAGATSDA EAGGVSNSGS HGGGGGHEEE 720
  721 EELSEIFIHQ SIHTIEYVLG SVSHTASYLR LWALSLAHAQ LAEVLWTMVL SIGLKQEGPV 780
  781 GGIVLTCVFA FWAILTVGIL VLMEGLSAFL HTLRLHWVEF QSKFYKGQGY AFQPFSFDAI 840
  841 IENGAAAAEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..492] PSI-BLAST 5.69897 COLICIN IA
    2 View Details [493..718] deduced N/A No confident structure predictions are available.
    3 View Details [719..850] MSA 3.112969 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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