| Protein: | Vha100-1-PG |
| Organism: | Drosophila melanogaster |
| Length: | 850 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Vha100-1-PG.
| Description | E-value | Query Range |
Subject Range |
|
|
834.0 | [0..1] | [847..1] |
|
Region A: Residues: [1-492] |
1 11 21 31 41 51
| | | | | |
1 MGSLFRSEEM ALCQLFLQSE AAYACVSELG ELGLVQFRDL NPDVNAFQRK FVNEVRRCDE 60
61 MERKLRYLEK EIKKDGIPML DTGESPEAPQ PREMIDLEAT FEKLENELRE VNQNAEALKR 120
121 NFLELTELKH ILRKTQVFFD EQEGGVNQTT ESMTRALITD EARTAGASMG PVQLGYMEKS 180
181 NEREDYLPCF VAGVILRERL PAFERMLWRA CRGNVFLRQA MIETPLEDPT NGDQVHKSVF 240
241 IIFFQGDQLK TRVKKICEGF RATLYPCPEA PADRREMAMG VMTRIEDLNT VLGQTQDHRH 300
301 RVLVAAAKNL KNWFVKVRKI KAIYHTLNLF NLDVTQKCLI AECWVPLLDI ETIQLALRRG 360
361 TERSGSSVPP ILNRMQTFEN PPTYNRTNKF TKAFQALIDA YGVASYREMN PAPYTIITFP 420
421 FLFAVMFGDL GHGAIMALFG LWMIRKEKGL AAQKTDNEIW NIFFGGRYII FLMGVFSMYT 480
481 GLIYNDIFSK SL
|
| Detection Method: |  |
| Confidence: | 5.69897 |
| Match: | 1ciiA |
| Description: | COLICIN IA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [493-718] |
1 11 21 31 41 51
| | | | | |
1 NIFGSHWHLS YNKSTVMENK FLQLSPKGDY EGAPYPFGMD PIWQVAGANK IIFHNAYKMK 60
61 ISIIFGVIHM IFGVVMSWHN HTYFRNRISL LYEFIPQLVF LLLLFFYMVL LMFIKWIKFA 120
121 ATNDKPYSEA CAPSILITFI DMVLFNTPKP PPENCETYMF MGQHFIQVLF VLVAVGCIPV 180
181 MLLAKPLLIM QARKQANVQP IAGATSDAEA GGVSNSGSHG GGGGHE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [719-850] |
1 11 21 31 41 51
| | | | | |
1 EEEELSEIFI HQSIHTIEYV LGSVSHTASY LRLWALSLAH AQLAEVLWTM VLSIGLKQEG 60
61 PVGGIVLTCV FAFWAILTVG ILVLMEGLSA FLHTLRLHWV EFQSKFYKGQ GYAFQPFSFD 120
121 AIIENGAAAA EE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
