YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: FBpp0307388, Vha...

General Information:
Name(s) found: FBpp0307388 [FlyBase]
Vha100-1-PD / FBpp0084749 [FlyBase]
Vha100-1-PB / FBpp0084744 [FlyBase]
Description(s) found:
Found 37 descriptions.
SHOW ALL
  • type=protein; loc=3R:join(24957431..24957547,24957848..24958024,24958098..24958226,24959583..24959683,24960771..24960897,24960984..24962139,24962204..24962421,24962798..24963008,24963074..24963245,24963306..24963408); ID=FBpp0307388; name=Vha100-1-PK; parent=FBgn0028671,FBtr0335405; dbxref=REFSEQ:NP_733276,GB_protein:AAN14160,FlyBase:FBpp0307388,FlyBase_Annotation_IDs:CG1709-PK; MD5=1139af40057c9081ffd20a2945ebb3f6; length=836; release=r5.56; species=Dmel; [FlyBase]
  • The gene Vha100-1 is referred to in FlyBase by the symbol Dmel\Vha100-1 (CG1709, FBgn0028671). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:24956772..24963702. It has the cytological map location 98F12. There is experimental evidence that it has the molecular function</span>: calmodulin binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: ATP synthesis coupled proton transport. 10 alleles are reported. No phenotypic data is available. It has 10 annotated transcripts and 10 annotated polypeptides. [FlyBase]
  • The gene Vha100-1 is referred to in FlyBase by the symbol Dmel\Vha100-1 (CG1709, FBgn0028671). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:24956772..24963702. It has the cytological map location 98F12. There is experimental evidence that it has the molecular function</span>: calmodulin binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: ATP synthesis coupled proton transport. 10 alleles are reported. No phenotypic data is available. It has 10 annotated transcripts and 10 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 836 amino acids

    Gene Ontology:
    Cellular Component: vacuolar proton-transporting V-type ATPase, V0 domain [ISS]
    synapse [IDA]
    Biological Process: ATP synthesis coupled proton transport [IEA]
    Molecular Function: calmodulin binding [IDA]
    hydrogen-exporting ATPase activity, phosphorylative mechanism [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLFRSEEM ALCQLFLQSE AAYACVSELG ELGLVQFRDL NPDVNAFQRK FVNEVRRCDE  60
   61 MERKLRYLEK EIKKDGIPML DTGESPEAPQ PREMIDLEAT FEKLENELRE VNQNAEALKR 120
  121 NFLELTELKH ILRKTQVFFD EQEGGVNQTT ESMTRALITD EARTAGASMG PVQLGFVAGV 180
  181 ILRERLPAFE RMLWRACRGN VFLRQAMIET PLEDPTNGDQ VHKSVFIIFF QGDQLKTRVK 240
  241 KICEGFRATL YPCPEAPADR REMAMGVMTR IEDLNTVLGQ TQDHRHRVLV AAAKNLKNWF 300
  301 VKVRKIKAIY HTLNLFNLDV TQKCLIAECW VPLLDIETIQ LALRRGTERS GSSVPPILNR 360
  361 MQTFENPPTY NRTNKFTKAF QALIDAYGVA SYREMNPAPY TIITFPFLFA VMFGDLGHGA 420
  421 IMALFGLWMI RKEKGLAAQK TDNEIWNIFF GGRYIIFLMG VFSMYTGLIY NDIFSKSLNI 480
  481 FGSHWHLSYN KSTVMENKFL QLSPKGDYEG APYPFGMDPI WQVAGANKII FHNAYKMKIS 540
  541 IIFGVIHMIF GVVMSWHNHT YFRNRISLLY EFIPQLVFLL LLFFYMVLLM FIKWIKFAAT 600
  601 NDKPYSEACA PSILITFIDM VLFNTPKPPP ENCETYMFMG QHFIQVLFVL VAVGCIPVML 660
  661 LAKPLLIMQA RKQANVQPIA GATSDAEAGG VSNSGSHGGG GGHEEEEELS EIFIHQSIHT 720
  721 IEYVLGSVSH TASYLRLWAL SLAHAQLAEV LWTMVLSIGL KQEGPVGGIV LTCVFAFWAI 780
  781 LTVGILVLME GLSAFLHTLR LHWVEFQSKF YKGQGYAFQP FSFDAIIENG AAAAEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..478] PSI-BLAST 6.39794 COLICIN IA
    2 View Details [479..682] deduced N/A No confident structure predictions are available.
    3 View Details [683..836] MSA 3.106978 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle