| Protein: | FBpp0307388, Vha... |
| Organism: | Drosophila melanogaster |
| Length: | 836 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0307388, Vha....
| Description | E-value | Query Range |
Subject Range |
|
|
828.0 | [0..1] | [833..1] |
|
Region A: Residues: [1-478] |
1 11 21 31 41 51
| | | | | |
1 MGSLFRSEEM ALCQLFLQSE AAYACVSELG ELGLVQFRDL NPDVNAFQRK FVNEVRRCDE 60
61 MERKLRYLEK EIKKDGIPML DTGESPEAPQ PREMIDLEAT FEKLENELRE VNQNAEALKR 120
121 NFLELTELKH ILRKTQVFFD EQEGGVNQTT ESMTRALITD EARTAGASMG PVQLGFVAGV 180
181 ILRERLPAFE RMLWRACRGN VFLRQAMIET PLEDPTNGDQ VHKSVFIIFF QGDQLKTRVK 240
241 KICEGFRATL YPCPEAPADR REMAMGVMTR IEDLNTVLGQ TQDHRHRVLV AAAKNLKNWF 300
301 VKVRKIKAIY HTLNLFNLDV TQKCLIAECW VPLLDIETIQ LALRRGTERS GSSVPPILNR 360
361 MQTFENPPTY NRTNKFTKAF QALIDAYGVA SYREMNPAPY TIITFPFLFA VMFGDLGHGA 420
421 IMALFGLWMI RKEKGLAAQK TDNEIWNIFF GGRYIIFLMG VFSMYTGLIY NDIFSKSL
|
| Detection Method: |  |
| Confidence: | 6.39794 |
| Match: | 1ciiA |
| Description: | COLICIN IA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [479-682] |
1 11 21 31 41 51
| | | | | |
1 NIFGSHWHLS YNKSTVMENK FLQLSPKGDY EGAPYPFGMD PIWQVAGANK IIFHNAYKMK 60
61 ISIIFGVIHM IFGVVMSWHN HTYFRNRISL LYEFIPQLVF LLLLFFYMVL LMFIKWIKFA 120
121 ATNDKPYSEA CAPSILITFI DMVLFNTPKP PPENCETYMF MGQHFIQVLF VLVAVGCIPV 180
181 MLLAKPLLIM QARKQANVQP IAGA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [683-836] |
1 11 21 31 41 51
| | | | | |
1 TSDAEAGGVS NSGSHGGGGG HEEEEELSEI FIHQSIHTIE YVLGSVSHTA SYLRLWALSL 60
61 AHAQLAEVLW TMVLSIGLKQ EGPVGGIVLT CVFAFWAILT VGILVLMEGL SAFLHTLRLH 120
121 WVEFQSKFYK GQGYAFQPFS FDAIIENGAA AAEE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
