YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CG6066-PA

General Information:
Name(s) found: CG6066-PA / FBpp0084501 [FlyBase]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • This gene is referred to in FlyBase by the symbol Dmel\CG6066 (CG6066, FBgn0039488). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:22940953..22942398. It has the cytological map location 97E2. Its molecular function is unknown. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 463 amino acids

    Gene Ontology:
    Cellular Component: catalytic step 2 spliceosome [IDA]
    Biological Process: nuclear mRNA splicing, via spliceosome [IC]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSRSRSRSR QRERRRSDSR ARSRSERRTY QKPQHRRSVS RERKRERDRE LHRERTSNRS  60
   61 SRRSREKDAV PRRRRTRSSP SRSSSSSSSD RSSSSRSPSR SRKSRPKSVE RWPNDRYHEN 120
  121 NDRRQNPFRG RAPEGSFIND PAEPSFRSQH RGRGSSNHQF KGDSKAVNAR RNQRVLIGEE 180
  181 GVPEVWGKSP SRPETDDVEL VKGSYIGPKK KKKKGKRKHK KSEKKSKKKS KKSKKKKSKQ 240
  241 ESSSSSSSSS SEDSSDESSS SSSSSSSDSE DESEEEDVWL EKTADGIKKP KKKKSSTSKK 300
  301 DKKSKKKKKK RKSEAEKSKK SSSSSASKSK NKESASHNDE DVGPSLRPGG SLNQKDFGKA 360
  361 LLPGEGAAMA AYIAEGKRIP RRGEIGLTSD EIANFESVGY VMSGSRHRRM EAVRIRKENQ 420
  421 LYSADEKRAL AMFSKEERQK RENKILSQFK DMIHSKLQAK DKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] deduced N/A No confident structure predictions are available.
    2 View Details [120..270] MSA 1.179996 View MSA. No confident structure predictions are available.
    3 View Details [271..337] deduced N/A No confident structure predictions are available.
    4 View Details [338..463] Pfam 90.886057 No description for PF06047.2 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle