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View Structure Prediction Details

Protein: CG6066-PA
Organism: Drosophila melanogaster
Length: 463 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6066-PA.

Description E-value Query
Range
Subject
Range
gi|70878103 - gi|70878103|gb|EAN91386.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71648919 - gi|71648919|ref|XP_813237.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
214.0 [0..2] [463..694]

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Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSRSRSRSR QRERRRSDSR ARSRSERRTY QKPQHRRSVS RERKRERDRE LHRERTSNRS  60
   61 SRRSREKDAV PRRRRTRSSP SRSSSSSSSD RSSSSRSPSR SRKSRPKSVE RWPNDRYHE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [120-270]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNDRRQNPFR GRAPEGSFIN DPAEPSFRSQ HRGRGSSNHQ FKGDSKAVNA RRNQRVLIGE  60
   61 EGVPEVWGKS PSRPETDDVE LVKGSYIGPK KKKKKGKRKH KKSEKKSKKK SKKSKKKKSK 120
  121 QESSSSSSSS SSEDSSDESS SSSSSSSSDS E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [271-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DESEEEDVWL EKTADGIKKP KKKKSSTSKK DKKSKKKKKK RKSEAEKSKK SSSSSASKSK  60
   61 NKESASH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [338-463]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDEDVGPSLR PGGSLNQKDF GKALLPGEGA AMAAYIAEGK RIPRRGEIGL TSDEIANFES  60
   61 VGYVMSGSRH RRMEAVRIRK ENQLYSADEK RALAMFSKEE RQKRENKILS QFKDMIHSKL 120
  121 QAKDKK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 90.886057
Match: PF06047.2
Description: No description for PF06047.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle