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Protein Overview: CG12290-PA, FBpp...

General Information:
Name(s) found: FBpp0308679 [FlyBase]
CG12290-PA / FBpp0084363 [FlyBase]
Description(s) found:
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  • gi|7301453|gb|AAF56578.1| CG12290 [Drosophila melanogaster] [NCBI NR]
  • gi|21356911|ref|NP_651470.1| CG12290 [Drosophila melanogaster] [NCBI NR]
  • gi|16182792|gb|AAL13580.1| GH12381p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=3R:22056427..22058823; ID=FBpp0308679; name=CG12290-PB; parent=FBgn0039419,FBtr0339612; dbxref=FlyBase:FBpp0308679,FlyBase_Annotation_IDs:CG12290-PB; MD5=7fd32ee4cc1913fb734cac07dac47d18; length=798; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG12290 (CG12290, FBgn0039419). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:22055974..22059070. It has the cytological map location 97A6. Based on sequence similarity, it is predicted to have molecular function</span>: G-protein coupled receptor activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: G-protein coupled receptor protein signaling pathway. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG12290-PA translation from_gene[CG12290 CG12290 FBgn0039419] seq_release:3 mol_weight=87674 cds_boundaries:(3R:22,045,792..22,048,185[+]) aa_length:798 transcript_info:[CG12290-RA seq_release:3] gene_info:[gene symbol:CG12290 FBgn0039419 gene_boundar [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VBG4) CG12290 protein (GH12381P) [DrosMelano7227.FASTAC.txt]
  • (AE003755) CG12290 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG12290-PA [Drosophila melanogaster]gi|16182792|gb|AAL13580.1| GH12381p [Drosophila melanogaster]gi|21356911|ref|NP_651470.1| CG12290-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:22056427..22058823; ID=FBpp0084363; name=CG12290-PA; parent=FBgn0039419,FBtr0084990; dbxref=FlyBase:FBpp0084363,FlyBase_Annotation_IDs:CG12290-PA,GB_protein:AAF56578.1,REFSEQ:NP_651470,GB_protein:AAF56578; MD5=7fd32ee4cc1913fb734cac07 [fly-100309-contam.fasta]
  • CG12290-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • GH12381p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:22056427..22058823; ID=FBpp0084363; name=CG12290-PA; parent=FBgn0039419,FBtr0084990; dbxref=FlyBase:FBpp0084363,FlyBase_Annotation_IDs:CG12290-PA,GB_protein:AAF56578.1,REFSEQ:NP_651470,GB_protein:AAF56578; MD5=7fd32ee4cc1913fb734cac07dac47d18; length=798; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:22056427..22058823; ID=FBpp0084363; name=CG12290-PA; parent=FBgn0039419,FBtr0084990; dbxref=FlyBase:FBpp0084363,FlyBase_Annotation_IDs:CG12290-PA,GB_protein:AAF56578.1,REFSEQ:NP_651470,GB_protein:AAF56578; MD5=7fd32ee4cc1913fb734cac07dac47d18; length=798; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG12290 OS=Drosophila melanogaster GN=CG12290 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:22056427..22058823; ID=FBpp0084363; name=CG12290-PA; parent=FBgn0039419,FBtr0084990; dbxref=FlyBase:FBpp0084363,FlyBase_Annotation_IDs:CG12290-PA,GB_protein:AAF56578.1,REFSEQ:NP_651470,GB_protein:AAF56578,FlyMine:FBpp0084363,modMine:FBpp0084363; MD5=7fd32ee4cc1913fb734cac07dac47d18; length=798; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:26230705..26233101; ID=FBpp0084363; name=CG12290-PA; parent=FBgn0039419,FBtr0084990; dbxref=FlyBase:FBpp0084363,FlyBase_Annotation_IDs:CG12290-PA,GB_protein:AAF56578.1,REFSEQ:NP_651470,GB_protein:AAF56578,FlyMine:FBpp0084363,modMine:FBpp0084363; MD5=7fd32ee4cc1913fb734cac07dac47d18; length=798; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:26230705..26233101; ID=FBpp0308679; name=CG12290-PB; parent=FBgn0039419,FBtr0339612; dbxref=FlyBase:FBpp0308679,FlyBase_Annotation_IDs:CG12290-PB,GB_protein:AHN57539,REFSEQ:NP_001287540; MD5=7fd32ee4cc1913fb734cac07dac47d18; length=798; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:26230705..26233101; ID=FBpp0084363; name=CG12290-PA; parent=FBgn0039419,FBtr0084990; dbxref=FlyBase:FBpp0084363,FlyBase_Annotation_IDs:CG12290-PA,GB_protein:AAF56578.1,REFSEQ:NP_651470,GB_protein:AAF56578,FlyMine:FBpp0084363,modMine:FBpp0084363; MD5=7fd32ee4cc1913fb734cac07dac47d18; length=798; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3R:26230705..26233101; ID=FBpp0308679; name=CG12290-PB; parent=FBgn0039419,FBtr0339612; dbxref=FlyBase:FBpp0308679,FlyBase_Annotation_IDs:CG12290-PB,GB_protein:AHN57539,REFSEQ:NP_001287540; MD5=7fd32ee4cc1913fb734cac07dac47d18; length=798; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG12290, isoform A OS=Drosophila melanogaster GN=CG12290 PE=2 SV=1 [DROME.fasta.20160308]
  • FBpp0084363 type=protein; loc=3R:26230705..26233101; ID=FBpp0084363; name=CG12290-PA; parent=FBgn0039419,FBtr0084990; dbxref=FlyBase:FBpp0084363,FlyBase_Annotation_IDs:CG12290-PA,GB_protein:AAF56578.1,REFSEQ:NP_651470,GB_protein:AAF56578,FlyMine:FBpp0084363,modMine:FBpp0084363; MD5=7fd32ee4cc1913fb734cac07dac47d18; length=798; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0308679 type=protein; loc=3R:26230705..26233101; ID=FBpp0308679; name=CG12290-PB; parent=FBgn0039419,FBtr0339612; dbxref=FlyBase:FBpp0308679,FlyBase_Annotation_IDs:CG12290-PB,GB_protein:AHN57539,REFSEQ:NP_001287540; MD5=7fd32ee4cc1913fb734cac07dac47d18; length=798; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:26230705..26233101; ID=FBpp0084363; name=CG12290-PA; parent=FBgn0039419,FBtr0084990; dbxref=FlyBase:FBpp0084363,FlyBase_Annotation_IDs:CG12290-PA,GB_protein:AAF56578.1,REFSEQ:NP_651470,GB_protein:AAF56578,UniProt/TrEMBL:Q9VBG4,FlyMine:FBpp0084363,modMine:FBpp0084363; MD5=7fd32ee4cc1913fb734cac07dac47d18; length=798; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3R:26230705..26233101; ID=FBpp0308679; name=CG12290-PB; parent=FBgn0039419,FBtr0339612; dbxref=FlyBase:FBpp0308679,FlyBase_Annotation_IDs:CG12290-PB,GB_protein:AHN57539,REFSEQ:NP_001287540,UniProt/TrEMBL:Q9VBG4; MD5=7fd32ee4cc1913fb734cac07dac47d18; length=798; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 798 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA][ISS]
    Biological Process: G-protein coupled receptor protein signaling pathway [IEA][ISS]
    Molecular Function: G-protein coupled receptor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIDLLILAL LLVSFLINLL ALCAFWITPG LRTTANRFTI NLLAINLIGC CILAPTLFLG  60
   61 LPGKSAEAST SNAETLEFFS KPGNHQVILR RNGQLVEQDG VVVRRNISEN GDTVETFFKC 120
  121 NATYCRELTI DERGDGGFVI TETETHEENL SAFESLPTEA PILPPVQLRC WSIDMTAALG 180
  181 ALAVLLVVGD TWCAVTDPLR YHSRISGVKT WIFIALTWVV GILFGALSAF RVLDFEADAL 240
  241 FSRQRRLAVT YFNISSTNSI FGVVYASVYF IVIILLPFGF VCGMYWRIFS EARGNGLRMR 300
  301 QNGSSPLLQS ALNLTAGQQA AQANQFSNSL CVHRHSISSA SSHGGNSSLG LGGLQMQIDQ 360
  361 RQQPRSSPSC LRRDSAAKVL LPTISDDGGS DAESGAGVQL MPVQEHSLSD RNQNIMLTLQ 420
  421 TASGEIKRNY SARQLPLLGT SSQDLRETNR LQGIRQVHSS PNLHKYTELR QDSLSEECGS 480
  481 PHLLGHAQRQ QQQQLHLQHQ QQQHHHHQQH HPHFSSPRHQ QHGHALQIPA IHASPKALSY 540
  541 MSSLRHRLSN ASSLFKYREE SRAARISILV VVMFVVSYLP FGLLVLLQSR LSAANFGGSS 600
  601 QLAIFMILLA NLSSPFIFAY RNKRVRRGVK RLFGLDSSSG LQRNCSSSVK TNGTAGPAAS 660
  661 GAQLQRNSSK LSQYSSNSCK YLTPQSSLVS QVPVHTTLTL RPNSSCSTII NFGGARGSAD 720
  721 SDEQPPATPP PTVAVAPPPT RPQRPKLQRG ITIVEHIAIT PTMPQKFQNR RARLFDMFFR 780
  781 SSKKLQAGCQ SQSLPTEV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..67] FFAS03 1.2 Rhodopsin
    2 View Details [68..388] PSI-BLAST 32.69897 Rhodopsin
    3 View Details [389..479] deduced N/A No confident structure predictions are available.
    4 View Details [480..657] FFAS03 3.72 Rhodopsin
    5 View Details [658..798] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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