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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG12290-PA, FBpp...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIDLLILAL LLVSFLINLL ALCAFWITPG LRTTANRFTI NLLAINLIGC CILAPTLFLG  60
   61 LPGKSAEAST SNAETLEFFS KPGNHQVILR RNGQLVEQDG VVVRRNISEN GDTVETFFKC 120
  121 NATYCRELTI DERGDGGFVI TETETHEENL SAFESLPTEA PILPPVQLRC WSIDMTAALG 180
  181 ALAVLLVVGD TWCAVTDPLR YHSRISGVKT WIFIALTWVV GILFGALSAF RVLDFEADAL 240
  241 FSRQRRLAVT YFNISSTNSI FGVVYASVYF IVIILLPFGF VCGMYWRIFS EARGNGLRMR 300
  301 QNGSSPLLQS ALNLTAGQQA AQANQFSNSL CVHRHSISSA SSHGGNSSLG LGGLQMQIDQ 360
  361 RQQPRSSPSC LRRDSAAKVL LPTISDDGGS DAESGAGVQL MPVQEHSLSD RNQNIMLTLQ 420
  421 TASGEIKRNY SARQLPLLGT SSQDLRETNR LQGIRQVHSS PNLHKYTELR QDSLSEECGS 480
  481 PHLLGHAQRQ QQQQLHLQHQ QQQHHHHQQH HPHFSSPRHQ QHGHALQIPA IHASPKALSY 540
  541 MSSLRHRLSN ASSLFKYREE SRAARISILV VVMFVVSYLP FGLLVLLQSR LSAANFGGSS 600
  601 QLAIFMILLA NLSSPFIFAY RNKRVRRGVK RLFGLDSSSG LQRNCSSSVK TNGTAGPAAS 660
  661 GAQLQRNSSK LSQYSSNSCK YLTPQSSLVS QVPVHTTLTL RPNSSCSTII NFGGARGSAD 720
  721 SDEQPPATPP PTVAVAPPPT RPQRPKLQRG ITIVEHIAIT PTMPQKFQNR RARLFDMFFR 780
  781 SSKKLQAGCQ SQSLPTEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle