| Protein: | CG12290-PA, FBpp... |
| Organism: | Drosophila melanogaster |
| Length: | 798 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG12290-PA, FBpp....
| Description | E-value | Query Range |
Subject Range |
|
|
397.0 | [0..1] | [798..1] |
|
Region A: Residues: [1-67] |
1 11 21 31 41 51
| | | | | |
1 MAIDLLILAL LLVSFLINLL ALCAFWITPG LRTTANRFTI NLLAINLIGC CILAPTLFLG 60
61 LPGKSAE
|
| Detection Method: |  |
| Confidence: | 1.2 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [68-388] |
1 11 21 31 41 51
| | | | | |
1 ASTSNAETLE FFSKPGNHQV ILRRNGQLVE QDGVVVRRNI SENGDTVETF FKCNATYCRE 60
61 LTIDERGDGG FVITETETHE ENLSAFESLP TEAPILPPVQ LRCWSIDMTA ALGALAVLLV 120
121 VGDTWCAVTD PLRYHSRISG VKTWIFIALT WVVGILFGAL SAFRVLDFEA DALFSRQRRL 180
181 AVTYFNISST NSIFGVVYAS VYFIVIILLP FGFVCGMYWR IFSEARGNGL RMRQNGSSPL 240
241 LQSALNLTAG QQAAQANQFS NSLCVHRHSI SSASSHGGNS SLGLGGLQMQ IDQRQQPRSS 300
301 PSCLRRDSAA KVLLPTISDD G
|
| Detection Method: | |
| Confidence: | 32.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [389-479] |
1 11 21 31 41 51
| | | | | |
1 GSDAESGAGV QLMPVQEHSL SDRNQNIMLT LQTASGEIKR NYSARQLPLL GTSSQDLRET 60
61 NRLQGIRQVH SSPNLHKYTE LRQDSLSEEC G
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [480-657] |
1 11 21 31 41 51
| | | | | |
1 SPHLLGHAQR QQQQQLHLQH QQQQHHHHQQ HHPHFSSPRH QQHGHALQIP AIHASPKALS 60
61 YMSSLRHRLS NASSLFKYRE ESRAARISIL VVVMFVVSYL PFGLLVLLQS RLSAANFGGS 120
121 SQLAIFMILL ANLSSPFIFA YRNKRVRRGV KRLFGLDSSS GLQRNCSSSV KTNGTAGP
|
| Detection Method: | |
| Confidence: | 3.72 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [658-798] |
1 11 21 31 41 51
| | | | | |
1 AASGAQLQRN SSKLSQYSSN SCKYLTPQSS LVSQVPVHTT LTLRPNSSCS TIINFGGARG 60
61 SADSDEQPPA TPPPTVAVAP PPTRPQRPKL QRGITIVEHI AITPTMPQKF QNRRARLFDM 120
121 FFRSSKKLQA GCQSQSLPTE V
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
