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Protein Overview: CG42235-PC

General Information:
Name(s) found: CG42235-PC / FBpp0288577 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG42235 (CG42235, FBgn0250757). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:21732752..21746768. It has the cytological map location 96F8. Based on sequence similarity, it is predicted to have molecular function</span>: sodium:iodide symporter activity; sodium-dependent multivitamin transmembrane transporter activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: vitamin transport. 14 alleles are reported. No phenotypic data is available. It has 5 annotated transcripts and 5 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 689 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [ISS]
    Biological Process: transmembrane transport [IEA]
    vitamin transport [ISS]
    Molecular Function: sodium:iodide symporter activity [ISS]
    sodium-dependent multivitamin transmembrane transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTADPVAL GVNSPVEDVV AKTTTTVANA IAKTVAVISS TVSTSSTTGA TSTISTSSST  60
   61 PTTSTTFAYT PTPTPTQSAS PSLEDGEEKL SVKDLSQALQ HFGIVDYLVF IAMLAVCAVI 120
  121 GFYFGFIEKK QKKQKLAGKD GGGAAGVEER RGSEALDYLV GGRQMKVFPV ALSLVASFVS 180
  181 GISLLGTSTE IYVYGTQYAF ILVTLAISGA ISWYIFLPVF CNLQLTSTYE YFQLRYGAGI 240
  241 RNLGSVLFIV GTMLWLPVAL YVPAITYNQV TGTGIHVITP IVCTICTFYT CVGGLKAVVW 300
  301 TDVIQSFVMF GSILAVCVKG TFDVGGLGVV LQRNEDGGRL NAPELTWDPT VRLSMLSVIL 360
  361 GGTLHKIQSS DVNQVSIQRF LSLPSYEHAK RCMLVFTVLL IFLLSCCSYM GLVSYAVYHD 420
  421 CDPISTKLAA AVDQLPSLLM MRTLGSLPGL PGLFVSGVFS AALSSLSTGL NSLACVITQD 480
  481 IVRPLLKVPM TERQTAFWLR AIVVVCGFCC LGMVNVVEKL GQVVPLATST AAVSMGPLLG 540
  541 IYCMGVGLPW VKGKSVLLGS VVSFLVLSWI CIKAQLAQMH GEIRYPKLPV SVDGCDYDFD 600
  601 NQTVHETIHE YRPSERNIYH LSFLWYTALG GFICTVVSVL AGFVFGWEDL NKMDPALITP 660
  661 CMRRFLPNKN YEAVKMQDLF KRKDEIESQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] FFAS03 1.0 NMR STRUCTURE OF THE TUMOR SUPPRESSOR BIN1: ALTERNATIVE SPLICING IN MELANOMA AND INTERACTION WITH C-MYC
    2 View Details [163..611] FFAS03 0.951 Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters
    3 View Details [612..689] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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