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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG42235-PC
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTADPVAL GVNSPVEDVV AKTTTTVANA IAKTVAVISS TVSTSSTTGA TSTISTSSST  60
   61 PTTSTTFAYT PTPTPTQSAS PSLEDGEEKL SVKDLSQALQ HFGIVDYLVF IAMLAVCAVI 120
  121 GFYFGFIEKK QKKQKLAGKD GGGAAGVEER RGSEALDYLV GGRQMKVFPV ALSLVASFVS 180
  181 GISLLGTSTE IYVYGTQYAF ILVTLAISGA ISWYIFLPVF CNLQLTSTYE YFQLRYGAGI 240
  241 RNLGSVLFIV GTMLWLPVAL YVPAITYNQV TGTGIHVITP IVCTICTFYT CVGGLKAVVW 300
  301 TDVIQSFVMF GSILAVCVKG TFDVGGLGVV LQRNEDGGRL NAPELTWDPT VRLSMLSVIL 360
  361 GGTLHKIQSS DVNQVSIQRF LSLPSYEHAK RCMLVFTVLL IFLLSCCSYM GLVSYAVYHD 420
  421 CDPISTKLAA AVDQLPSLLM MRTLGSLPGL PGLFVSGVFS AALSSLSTGL NSLACVITQD 480
  481 IVRPLLKVPM TERQTAFWLR AIVVVCGFCC LGMVNVVEKL GQVVPLATST AAVSMGPLLG 540
  541 IYCMGVGLPW VKGKSVLLGS VVSFLVLSWI CIKAQLAQMH GEIRYPKLPV SVDGCDYDFD 600
  601 NQTVHETIHE YRPSERNIYH LSFLWYTALG GFICTVVSVL AGFVFGWEDL NKMDPALITP 660
  661 CMRRFLPNKN YEAVKMQDLF KRKDEIESQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle