| Protein: | CG42235-PC |
| Organism: | Drosophila melanogaster |
| Length: | 689 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG42235-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
340.0 | [0..99] | [675..6] |
|
Region A: Residues: [1-162] |
1 11 21 31 41 51
| | | | | |
1 MSTTADPVAL GVNSPVEDVV AKTTTTVANA IAKTVAVISS TVSTSSTTGA TSTISTSSST 60
61 PTTSTTFAYT PTPTPTQSAS PSLEDGEEKL SVKDLSQALQ HFGIVDYLVF IAMLAVCAVI 120
121 GFYFGFIEKK QKKQKLAGKD GGGAAGVEER RGSEALDYLV GG
|
| Detection Method: |  |
| Confidence: | 1.0 |
| Match: | 1mv3A |
| Description: | NMR STRUCTURE OF THE TUMOR SUPPRESSOR BIN1: ALTERNATIVE SPLICING IN MELANOMA AND INTERACTION WITH C-MYC |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [163-611] |
1 11 21 31 41 51
| | | | | |
1 RQMKVFPVAL SLVASFVSGI SLLGTSTEIY VYGTQYAFIL VTLAISGAIS WYIFLPVFCN 60
61 LQLTSTYEYF QLRYGAGIRN LGSVLFIVGT MLWLPVALYV PAITYNQVTG TGIHVITPIV 120
121 CTICTFYTCV GGLKAVVWTD VIQSFVMFGS ILAVCVKGTF DVGGLGVVLQ RNEDGGRLNA 180
181 PELTWDPTVR LSMLSVILGG TLHKIQSSDV NQVSIQRFLS LPSYEHAKRC MLVFTVLLIF 240
241 LLSCCSYMGL VSYAVYHDCD PISTKLAAAV DQLPSLLMMR TLGSLPGLPG LFVSGVFSAA 300
301 LSSLSTGLNS LACVITQDIV RPLLKVPMTE RQTAFWLRAI VVVCGFCCLG MVNVVEKLGQ 360
361 VVPLATSTAA VSMGPLLGIY CMGVGLPWVK GKSVLLGSVV SFLVLSWICI KAQLAQMHGE 420
421 IRYPKLPVSV DGCDYDFDNQ TVHETIHEY
|
| Detection Method: | |
| Confidence: | 0.951 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [612-689] |
1 11 21 31 41 51
| | | | | |
1 RPSERNIYHL SFLWYTALGG FICTVVSVLA GFVFGWEDLN KMDPALITPC MRRFLPNKNY 60
61 EAVKMQDLFK RKDEIESQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
