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Protein Overview: CG11820-PA

General Information:
Name(s) found: CG11820-PA / FBpp0084140 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG11820 (CG11820, FBgn0039270). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:20891526..20892440. It has the cytological map location 96B19. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 231 amino acids

    Gene Ontology:
    Cellular Component: catalytic step 2 spliceosome [IDA]
    precatalytic spliceosome [IDA]
    Biological Process: nuclear mRNA splicing, via spliceosome [IC]
    Molecular Function: protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLPAALLQR LKKRGLVTKQ SGAAPISEAI EEIIAENYDD DDKSGPYPYK EDTSPEPKRR  60
   61 SVEEKFWSHR IKERIGVNES YHGYKLCPNK YNIYHKCSLY CVNKFNSSPL SQPSHRYLKR 120
  121 YKRLLRKYPL EAGWKDVYDK GCKAFYFYNS TTQTVSWLPP SHPKARITNS AAVFRRQLAN 180
  181 SNDEFNFDTN MVQPKSSNQN EPDEPDVFVP AKKQKSRDLE RKIQRRRRND N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..104] MSA 1.008994 View MSA. No confident structure predictions are available.
    2 View Details [105..231] FFAS03 2.48 No description for 2ysdA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle