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View Structure Prediction Details

Protein: CG11820-PA
Organism: Drosophila melanogaster
Length: 231 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11820-PA.

Description E-value Query
Range
Subject
Range
pqbp-1.1 - status:Confirmed UniProt:O16786 protein_id:AAC48091.2
266.0 [0..1] [230..1]
gi|39580926, gi|... - gi|39580926|emb|CAE65556.1| Hypothetical protein CBG10545 [Caenorhabditis briggsae], gi|187030963|em...
gi|157759267 - gi|157759267|ref|XP_001671977.1| Hypothetical protein CBG10545 [Caenorhabditis briggsae AF16]
255.0 [0..1] [230..1]
gi|58394482, gi|... - gi|58394482|ref|XP_320753.2| ENSANGP00000014136 [Anopheles gambiae str. PEST], gi|55234927|gb|EAA007...
228.0 [0..31] [194..91]
gi|108883844, gi... - gi|157111660|ref|XP_001651670.1| hypothetical protein AaeL_AAEL000875 [Aedes aegypti], gi|108883844|...
191.0 [0..3] [186..2]
gi|82999708 - gi|82999708|ref|XP_924476.1| PREDICTED: similar to Polyglutamine binding protein 1 isoform 3 [Mus mu...
157.0 [0..116] [229..63]
gi|67508883 - gi|67508883|emb|CAJ00551.1| polyglutamine binding protein variant 12 [Homo sapiens]
147.0 [0..116] [222..36]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLPAALLQR LKKRGLVTKQ SGAAPISEAI EEIIAENYDD DDKSGPYPYK EDTSPEPKRR  60
   61 SVEEKFWSHR IKERIGVNES YHGYKLCPNK YNIYHKCSLY CVNK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [105-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FNSSPLSQPS HRYLKRYKRL LRKYPLEAGW KDVYDKGCKA FYFYNSTTQT VSWLPPSHPK  60
   61 ARITNSAAVF RRQLANSNDE FNFDTNMVQP KSSNQNEPDE PDVFVPAKKQ KSRDLERKIQ 120
  121 RRRRNDN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.48
Match: 2ysdA
Description: No description for 2ysdA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle