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Protein Overview: CG13625-PA

General Information:
Name(s) found: CG13625-PA / FBpp0084051 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG13625 (CG13625, FBgn0039210). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:20408787..20410855. It has the cytological map location 96A9. Its molecular function is unknown. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 647 amino acids

    Gene Ontology:
    Cellular Component: catalytic step 2 spliceosome [IDA]
    Biological Process: nuclear mRNA splicing, via spliceosome [IC]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMQKAKVID QKEYLKKYLS GDKEKKKKKK EKKHKKNSAN TKVKIIDDDA YENDNLEMDE  60
   61 DLLLGGEDAP QIVGEYIEED PNVRSKWRNI AVKDEIKEEH EESSPATGIR IKQEPLDEEQ 120
  121 EMWGRKATVV KVKDEFSPSR RSSPVRIKQE KRSSSRDLSP ARSSKPAKRE ESPQRGRRRA 180
  181 GSSDQSPTRR GRDGDQSPPR QKHRDSDQSP PRKARNGNQS PVRKRRDSDQ SPPRKRTGKA 240
  241 SPTRRRRDSD QSPPRRRRSN SDQSPPRRRR DKDSTPPRRR KDSDQSPPRR RKADDQSPVR 300
  301 RERKDSDQSP PRKRRDNDQS PVRRRRDSDQ SPPRRRRDDK QTPPRRRRNS DQSPPRRPKD 360
  361 VDQSPPRRKR DFDQSPTRKR DKSPRRRHDS DQSPARNHRS RERSPPPRNR FKEERKSRWA 420
  421 KASPSKSASP PPTHKPKSTK TLDGKKAGLQ DAKSLKKETD ERRRQEHELF EKMSSEISGR 480
  481 DGDVQVRSTR RKGHRARDAA NEDPAEQGRK EEHEKKKKEL YDRWGKGLKQ IEDHKSRLEE 540
  541 MVHEASKPVA RYANDEDLDR HLREQEHADD PMLEYMRQKR KKRDQQDNKP VMPKYEGSFP 600
  601 ENRFGIRPGY RWDGVDRSNG YEQRWFDKQN ERRAVQDEAY KYSVEDM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..110] deduced N/A No confident structure predictions are available.
    2 View Details [111..361] MSA 1.277996 View MSA. No confident structure predictions are available.
    3 View Details [362..471] deduced N/A No confident structure predictions are available.
    4 View Details [472..647] MSA 2.261993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle