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View Structure Prediction Details

Protein: CG13625-PA
Organism: Drosophila melanogaster
Length: 647 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13625-PA.

Description E-value Query
Range
Subject
Range
gi|70878103 - gi|70878103|gb|EAN91386.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71648919 - gi|71648919|ref|XP_813237.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
206.0 [0..3] [645..757]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMQKAKVID QKEYLKKYLS GDKEKKKKKK EKKHKKNSAN TKVKIIDDDA YENDNLEMDE  60
   61 DLLLGGEDAP QIVGEYIEED PNVRSKWRNI AVKDEIKEEH EESSPATGIR 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [111-361]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IKQEPLDEEQ EMWGRKATVV KVKDEFSPSR RSSPVRIKQE KRSSSRDLSP ARSSKPAKRE  60
   61 ESPQRGRRRA GSSDQSPTRR GRDGDQSPPR QKHRDSDQSP PRKARNGNQS PVRKRRDSDQ 120
  121 SPPRKRTGKA SPTRRRRDSD QSPPRRRRSN SDQSPPRRRR DKDSTPPRRR KDSDQSPPRR 180
  181 RKADDQSPVR RERKDSDQSP PRKRRDNDQS PVRRRRDSDQ SPPRRRRDDK QTPPRRRRNS 240
  241 DQSPPRRPKD V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [362-471]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DQSPPRRKRD FDQSPTRKRD KSPRRRHDSD QSPARNHRSR ERSPPPRNRF KEERKSRWAK  60
   61 ASPSKSASPP PTHKPKSTKT LDGKKAGLQD AKSLKKETDE RRRQEHELFE 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [472-647]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KMSSEISGRD GDVQVRSTRR KGHRARDAAN EDPAEQGRKE EHEKKKKELY DRWGKGLKQI  60
   61 EDHKSRLEEM VHEASKPVAR YANDEDLDRH LREQEHADDP MLEYMRQKRK KRDQQDNKPV 120
  121 MPKYEGSFPE NRFGIRPGYR WDGVDRSNGY EQRWFDKQNE RRAVQDEAYK YSVEDM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle