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Protein Overview: srb-17

General Information:
Name(s) found: srb-17 / CE40555 [WormBase]
Description(s) found:
Found 11 descriptions.
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  • WBGene00008489 locus:srb-17 7TM receptor, srb family status:Partially_confirmed UniProt:O02241 protein_id:CAB02886.3 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 341 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: sensory perception of chemical stimulus [IEALink to PubMed article]
    Molecular Function: transmembrane receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYDFAVEITD EFCQIAFPGA FHPAFLLVKL YHILLSVISM GSIIYFFLNY SNLLAFHFNI  60
   61 KILFFFQFCS CFLQSATLAI SQTHHLVLAL IANGPCDVIL APALFALFNL PLIFSMLCME 120
  121 FSQVLMVIER TLASCLFVCY EKTTKTIGFV LTSFAVIVPG LTCLYMYYDD KFNYPQMSAM 180
  181 ATSPSSKLRI NYIFITINVL NVLTLMHSIG LYRHNKQKIN MVKGRDHFIL SSRFQMNENV 240
  241 SSSKLLWRLS CAQLIIFLLY GCAMYSLRIF LPGERSAVWQ AVTEFCYTPP LYCAIMPLIC 300
  301 IVCAQNSLKQ RNSKVQSLIT LRSVGQEGWD NYQGMLQKQW E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..341] PSI-BLAST 49.30103 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle