| Protein: | srb-17 |
| Organism: | Caenorhabditis elegans |
| Length: | 341 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srb-17.
| Description | E-value | Query Range |
Subject Range |
|
|
198.0 | [0..2] | [319..143] |
|
Region A: Residues: [1-341] |
1 11 21 31 41 51
| | | | | |
1 MYDFAVEITD EFCQIAFPGA FHPAFLLVKL YHILLSVISM GSIIYFFLNY SNLLAFHFNI 60
61 KILFFFQFCS CFLQSATLAI SQTHHLVLAL IANGPCDVIL APALFALFNL PLIFSMLCME 120
121 FSQVLMVIER TLASCLFVCY EKTTKTIGFV LTSFAVIVPG LTCLYMYYDD KFNYPQMSAM 180
181 ATSPSSKLRI NYIFITINVL NVLTLMHSIG LYRHNKQKIN MVKGRDHFIL SSRFQMNENV 240
241 SSSKLLWRLS CAQLIIFLLY GCAMYSLRIF LPGERSAVWQ AVTEFCYTPP LYCAIMPLIC 300
301 IVCAQNSLKQ RNSKVQSLIT LRSVGQEGWD NYQGMLQKQW E
|
| Detection Method: |  |
| Confidence: | 49.30103 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
