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Protein Overview: mira-PA

General Information:
Name(s) found: mira-PA / FBpp0083256 [FlyBase]
Description(s) found:
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  • gi|23171762|gb|AAF55723.2| miranda, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|17137434|ref|NP_477291.1| miranda, isoform A [Drosophila melanogaster] [NCBI NR]
  • The gene miranda is referred to in FlyBase by the symbol Dmel\mira (CG12249, FBgn0021776). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:15757521..15760842. It has the cytological map location 92B9. There is experimental evidence that it has the molecular function</span>: myosin binding. There is experimental evidence that it is involved in the biological process</span>: neuroblast proliferation; regulation of pole plasm oskar mRNA localization; asymmetric protein localization; oogenesis; regulation of proteolysis; determination of anterior/posterior axis, embryo. 27 alleles are reported. The phenotypes of these alleles are annotated with: commissure; embryonic head; embryonic glial cell; cell body glial cell; longitudinal connective; embryonic thorax; embryonic neuron; neuroblast NB6-4 of thorax. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG12249-PA translation from_gene[CG12249 mira FBgn0021776] seq_release:3 mol_weight=93102 cds_boundaries:(3R:15,757,926..15,760,412[-]) aa_length:829 transcript_info:[CG12249-RA seq_release:3] gene_info:[gene symbol:mira FBgn0021776 gene_boundaries:(3 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VDR7) CG12249 protein [DrosMelano7227.FASTAC.txt]
  • CG12249-PA, isoform A [Drosophila melanogaster]gi|17137434|ref|NP_477291.1| CG12249-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(15757906..15760395); ID=FBpp0083256; name=mira-PA; parent=FBgn0021776,FBtr0083847; dbxref=FlyBase:FBpp0083256,FlyBase_Annotation_IDs:CG12249-PA,GB_protein:AAF55723.2,REFSEQ:NP_477291,GB_protein:AAF55723; MD5=f2ff057ea336b13 [fly-100309-contam.fasta]
  • miranda CG12249-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG12249-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(15757906..15760395); ID=FBpp0083256; name=mira-PA; parent=FBgn0021776,FBtr0083847; dbxref=FlyBase:FBpp0083256,FlyBase_Annotation_IDs:CG12249-PA,GB_protein:AAF55723.2,REFSEQ:NP_477291,GB_protein:AAF55723; MD5=f2ff057ea336b134ba7caac109e1131f; length=829; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(15757906..15760395); ID=FBpp0083256; name=mira-PA; parent=FBgn0021776,FBtr0083847; dbxref=FlyBase:FBpp0083256,FlyBase_Annotation_IDs:CG12249-PA,GB_protein:AAF55723.2,REFSEQ:NP_477291,GB_protein:AAF55723; MD5=f2ff057ea336b134ba7caac109e1131f; length=829; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Miranda, isoform A OS=Drosophila melanogaster GN=mira PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(15757906..15760395); ID=FBpp0083256; name=mira-PA; parent=FBgn0021776,FBtr0083847; dbxref=FlyBase:FBpp0083256,FlyBase_Annotation_IDs:CG12249-PA,GB_protein:AAF55723.2,REFSEQ:NP_477291,GB_protein:AAF55723,FlyMine:FBpp0083256,modMine:FBpp0083256; MD5=f2ff057ea336b134ba7caac109e1131f; length=829; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:complement(19932184..19934673); ID=FBpp0083256; name=mira-PA; parent=FBgn0021776,FBtr0083847; dbxref=FlyBase:FBpp0083256,FlyBase_Annotation_IDs:CG12249-PA,GB_protein:AAF55723.2,REFSEQ:NP_477291,GB_protein:AAF55723,FlyMine:FBpp0083256,modMine:FBpp0083256; MD5=f2ff057ea336b134ba7caac109e1131f; length=829; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(19932184..19934673); ID=FBpp0083256; name=mira-PA; parent=FBgn0021776,FBtr0083847; dbxref=FlyBase:FBpp0083256,FlyBase_Annotation_IDs:CG12249-PA,GB_protein:AAF55723.2,REFSEQ:NP_477291,GB_protein:AAF55723,FlyMine:FBpp0083256,modMine:FBpp0083256; MD5=f2ff057ea336b134ba7caac109e1131f; length=829; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Miranda, isoform A OS=Drosophila melanogaster GN=mira PE=1 SV=2 [DROME.fasta.20160308]
  • FBpp0083256 type=protein; loc=3R:complement(19932184..19934673); ID=FBpp0083256; name=mira-PA; parent=FBgn0021776,FBtr0083847; dbxref=FlyBase:FBpp0083256,FlyBase_Annotation_IDs:CG12249-PA,GB_protein:AAF55723.2,REFSEQ:NP_477291,GB_protein:AAF55723,FlyMine:FBpp0083256,modMine:FBpp0083256; MD5=f2ff057ea336b134ba7caac109e1131f; length=829; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(19932184..19934673); ID=FBpp0083256; name=mira-PA; parent=FBgn0021776,FBtr0083847; dbxref=FlyBase:FBpp0083256,FlyBase_Annotation_IDs:CG12249-PA,GB_protein:AAF55723.2,REFSEQ:NP_477291,GB_protein:AAF55723,UniProt/TrEMBL:Q9VDR7,FlyMine:FBpp0083256,modMine:FBpp0083256; MD5=f2ff057ea336b134ba7caac109e1131f; length=829; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 829 amino acids

    Gene Ontology:
    Cellular Component: apical part of cell [IDA][TAS]
    cytoplasm [IDA][TAS]
    basal part of cell [IDA][TAS]
    cell cortex [IDA]
    aster [IDA]
    apical cortex [IDA]
    basal cortex [IDA][NAS][TAS]
    Biological Process: neuroblast proliferation [IMP]
    regulation of pole plasm oskar mRNA localization [IMP]
    intracellular mRNA localization [NAS]
    anterior/posterior axis specification, embryo [IMP]
    asymmetric protein localization involved in cell fate determination [TAS]
    oogenesis [IGI]
    regulation of proteolysis [IMP]
    neuroblast fate determination [TAS]
    asymmetric neuroblast division [TAS]
    asymmetric protein localization [IGI][IMP][IPI]
    ganglion mother cell fate determination [TAS]
    Molecular Function: actin binding [ISS]
    myosin binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFSKAKLKR FNDVDVAICG SPAASNSSAG SAGSATPTAS SAAAAPPTVQ PERKEQIEKF  60
   61 FKDAVRFASS SKEAKEFAIP KEDKKSKGLR LFRTPSLPQR LRFRPTPSHT DTATGSGSGA 120
  121 STAASTPLHS AATTPVKEAK SASRLKGKEA LQYEIRHKNE LIESQLSQLD VLRRHVDQLK 180
  181 EAEAKLREEH ELATSKTDRL IEALTSENLS HKALNEQMGQ EHADLLERLA AMEQQLQQQH 240
  241 DEHERQVEAL VAESEALRLA NELLQTANED RQKVEEQLQA QLSALQADVA QAREHCSLEQ 300
  301 AKTAENIELV ENLQKTNASL LADVVQLKQQ IEQDALSYGQ EAKSCQAELE CLKVERNTLK 360
  361 NDLANKCTLI RSLQDELLDK NCEIDAHCDT IRQLCREQAR HTEQQQAVAK VQQQVESDLE 420
  421 SAVEREKSYW RAELDKRQKL AENELIKIEL EKQDVMVLLE TTNDMLRMRD EKLQKCEEQL 480
  481 RNGIDYYIQL SDALQQQLVQ LKQDMAKTIT EKYNYQLTLT NTRATVNILM ERLKKSDADV 540
  541 EQYRAELESV QLAKGALEQS YLVLQADAEQ LRQQLTESQD ALNALRSSSQ TLQSEVSLKE 600
  601 SLLHELLAGE AETLAKFNQI ANSFQERIDG DAQLAHYHEL RRKDETREAY MVDMKKALDE 660
  661 FATVLQFAQL ELDNKEQMLV KVREECEQLK LENIALKSKQ PGSASLLGTP GKANRSNTTD 720
  721 LEKIEDLLCD SELRSDCEKI TTWLLNSSDK CVRQDTTSEI NELLSAGKSS PRPAPRTPKA 780
  781 PHTPRSPRTP HTPRTPRSAA STPKKTVLFA GKENVPSPPQ KQVLKARNI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..313] PSI-BLAST 6.522879 No description for 2i1jA was found.
    2 View Details [314..491] FFAS03 2.2 No description for 2i1jA was found.
    3 View Details [492..829] PSI-BLAST 16.39794 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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