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Protein Overview: CG11407-PA

General Information:
Name(s) found: CG11407-PA / FBpp0083204 [FlyBase]
Description(s) found:
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  • gi|7300546|gb|AAF55699.1| CG11407 [Drosophila melanogaster] [NCBI NR]
  • gi|21356441|ref|NP_650831.1| CG11407 [Drosophila melanogaster] [NCBI NR]
  • gi|16183212|gb|AAL13659.1| GH20840p [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG11407 (CG11407, FBgn0038733). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:15606974..15608868. It has the cytological map location 92B2. Based on sequence similarity, it is predicted to have molecular function</span>: long-chain fatty acid transporter activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: metabolic process. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG11407-PA translation from_gene[CG11407 CG11407 FBgn0038733] seq_release:3 mol_weight=60610 cds_boundaries:(3R:15,607,047..15,608,771[+]) aa_length:538 transcript_info:[CG11407-RA seq_release:3] gene_info:[gene symbol:CG11407 FBgn0038733 gene_boundar [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VDU1) CG11407 protein (GH20840P) [DrosMelano7227.FASTAC.txt]
  • (AE003727) CG11407 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG11407-PA [Drosophila melanogaster]gi|16183212|gb|AAL13659.1| GH20840p [Drosophila melanogaster]gi|21356441|ref|NP_650831.1| CG11407-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:join(15607030..15607173,15607233..15607744,15607797..15608757); ID=FBpp0083204; name=CG11407-PA; parent=FBgn0038733,FBtr0083790; dbxref=FlyBase:FBpp0083204,FlyBase_Annotation_IDs:CG11407-PA,GB_protein:AAF55699.1,REFSEQ:NP_650831,GB_pr [fly-100309-contam.fasta]
  • GH20840p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG11407-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:join(15607030..15607173,15607233..15607744,15607797..15608757); ID=FBpp0083204; name=CG11407-PA; parent=FBgn0038733,FBtr0083790; dbxref=FlyBase:FBpp0083204,FlyBase_Annotation_IDs:CG11407-PA,GB_protein:AAF55699.1,REFSEQ:NP_650831,GB_protein:AAF55699; MD5=1e1ab3c74995ca5cb23ca1269e43a820; length=538; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(15607030..15607173,15607233..15607744,15607797..15608757); ID=FBpp0083204; name=CG11407-PA; parent=FBgn0038733,FBtr0083790; dbxref=FlyBase:FBpp0083204,FlyBase_Annotation_IDs:CG11407-PA,GB_protein:AAF55699.1,REFSEQ:NP_650831,GB_protein:AAF55699; MD5=1e1ab3c74995ca5cb23ca1269e43a820; length=538; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG11407 OS=Drosophila melanogaster GN=CG11407 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:join(15607030..15607173,15607233..15607744,15607797..15608757); ID=FBpp0083204; name=CG11407-PA; parent=FBgn0038733,FBtr0083790; dbxref=FlyBase:FBpp0083204,FlyBase_Annotation_IDs:CG11407-PA,GB_protein:AAF55699.1,REFSEQ:NP_650831,GB_protein:AAF55699,FlyMine:FBpp0083204,modMine:FBpp0083204; MD5=1e1ab3c74995ca5cb23ca1269e43a820; length=538; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • CG11407 OS=Drosophila melanogaster GN=CG11407 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3R:join(19781308..19781451,19781511..19782022,19782075..19783035); ID=FBpp0083204; name=CG11407-PA; parent=FBgn0038733,FBtr0083790; dbxref=FlyBase:FBpp0083204,FlyBase_Annotation_IDs:CG11407-PA,GB_protein:AAF55699.1,REFSEQ:NP_650831,GB_protein:AAF55699,FlyMine:FBpp0083204,modMine:FBpp0083204; MD5=1e1ab3c74995ca5cb23ca1269e43a820; length=538; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(19781308..19781451,19781511..19782022,19782075..19783035); ID=FBpp0083204; name=CG11407-PA; parent=FBgn0038733,FBtr0083790; dbxref=FlyBase:FBpp0083204,FlyBase_Annotation_IDs:CG11407-PA,GB_protein:AAF55699.1,REFSEQ:NP_650831,GB_protein:AAF55699,FlyMine:FBpp0083204,modMine:FBpp0083204; MD5=1e1ab3c74995ca5cb23ca1269e43a820; length=538; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q9VDU3, CG11407 OS=Drosophila melanogaster GN=CG11407 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0083204 type=protein; loc=3R:join(19781308..19781451,19781511..19782022,19782075..19783035); ID=FBpp0083204; name=CG11407-PA; parent=FBgn0038733,FBtr0083790; dbxref=FlyBase:FBpp0083204,FlyBase_Annotation_IDs:CG11407-PA,GB_protein:AAF55699.1,REFSEQ:NP_650831,GB_protein:AAF55699,FlyMine:FBpp0083204,modMine:FBpp0083204; MD5=1e1ab3c74995ca5cb23ca1269e43a820; length=538; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:join(19781308..19781451,19781511..19782022,19782075..19783035); ID=FBpp0083204; name=CG11407-PA; parent=FBgn0038733,FBtr0083790; dbxref=FlyBase:FBpp0083204,FlyBase_Annotation_IDs:CG11407-PA,GB_protein:AAF55699.1,REFSEQ:NP_650831,GB_protein:AAF55699,UniProt/TrEMBL:Q9VDU1,FlyMine:FBpp0083204,modMine:FBpp0083204; MD5=1e1ab3c74995ca5cb23ca1269e43a820; length=538; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 538 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    long-chain fatty acid transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYRPASYYD ADRKIWSGDQ LEYYFDPHLS IGEIIFNEMR RHPQLIAQIS ATENTILTRA  60
   61 ELQANAMHIA SYMRSLGLLQ MDIVGIIARN TTHISAVAYA CFFNGIAFHS LNISYEQSTI 120
  121 EKLFSITRPN IIFCDGDEFE KVRSATAQLD VKIITMRNHP SGSIRIDQVL STPIEKNFQP 180
  181 VRLEQGNDQT LAILCSSGTT GIPKAVTITN SRQILNSSHS LTTNDVQYSH STLDWITGLL 240
  241 TTVTSGVFST KRIIADNIFD PEFFMRLVEE HQITWIIQAP AHMAMMVNSP SFTTSDLSSL 300
  301 RYYLFGGSRA SVETQHRIRS RLSKDCLHFA YGFTELGSMA ALNLHFDEKP NSVGRLVAGL 360
  361 KLKVICEKGE SLGPDEVGEL CLWNGQYWAG YYGNPEETHK MRDHHNWFHT GDLGYVDDDG 420
  421 FIYIVERKKD MLKFQNIMYY PNEIESVISK MPDVVEVCVF GVWNEINGDE ATAAVVKKRG 480
  481 SALTAQDIVD YVETHIDAKY KQLNGGAIIV EDLVRSPNGK TNRMANKAFF LEAKSSAK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..538] PSI-BLAST 111.0 FIREFLY LUCIFERASE IN COMPLEX WITH BROMOFORM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • fatty acid ligase activity
    		•  4.83067429373059 bayes_pls_golite062009
  • long-chain fatty acid-CoA ligase activity
    		•  4.72692389032116 bayes_pls_golite062009
  • ligase activity, forming carbon-sulfur bonds
    		•  4.4819902512335 bayes_pls_golite062009
  • acetate-CoA ligase activity
    		•  3.08569212862289 bayes_pls_golite062009
  • acid-thiol ligase activity
    		•  2.89129353633634 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)
    		•  2.74744781333102 bayes_pls_golite062009
  • Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity
    		•  2.74744781333102 bayes_pls_golite062009
  • luciferin monooxygenase activity
    		•  2.67396462766343 bayes_pls_golite062009
  • CoA-ligase activity
    		•  2.5960476232329 bayes_pls_golite062009
  • ligase activity
    		•  2.49556073715112 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.31193176808353 bayes_pls_golite062009
  • catalytic activity
    		•  1.83545185797733 bayes_pls_golite062009
  • binding
    		•  1.5312519256537 bayes_pls_golite062009
  • transcription repressor activity
    		•  1.2638869228049 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.62

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle