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Protein Overview: CG6300-PA

General Information:
Name(s) found: CG6300-PA / FBpp0083209 [FlyBase]
Description(s) found:
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  • gi|24648253|ref|NP_650828.1| CG6300 [Drosophila melanogaster] [NCBI NR]
  • gi|23171742|gb|AAF55696.2| CG6300 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG6300 (CG6300, FBgn0038730). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:15596568..15598947. It has the cytological map location 92B2. Based on sequence similarity, it is predicted to have molecular function</span>: long-chain fatty acid transporter activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: metabolic process. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG6300-PA translation from_gene[CG6300 CG6300 FBgn0038730] seq_release:3 mol_weight=60203 cds_boundaries:(3R:15,597,184..15,598,914[-]) aa_length:537 transcript_info:[CG6300-RA seq_release:3] gene_info:[gene symbol:CG6300 FBgn0038730 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VDU4) CG6300 protein [DrosMelano7227.FASTAC.txt]
  • CG6300-PA [Drosophila melanogaster]gi|24648253|ref|NP_650828.1| CG6300-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(15597164..15598121,15598184..15598695,15598754..15598897); ID=FBpp0083209; name=CG6300-PA; parent=FBgn0038730,FBtr0083798; dbxref=FlyBase:FBpp0083209,FlyBase_Annotation_IDs:CG6300-PA,GB_protein:AAF55696.2,REFSEQ:NP_650828,G [fly-100309-contam.fasta]
  • CG6300-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(15597164..15598121,15598184..15598695,15598754..15598897); ID=FBpp0083209; name=CG6300-PA; parent=FBgn0038730,FBtr0083798; dbxref=FlyBase:FBpp0083209,FlyBase_Annotation_IDs:CG6300-PA,GB_protein:AAF55696.2,REFSEQ:NP_650828,GB_protein:AAF55696; MD5=0887a0fea28f7ba1e12b477767cba441; length=537; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(15597164..15598121,15598184..15598695,15598754..15598897); ID=FBpp0083209; name=CG6300-PA; parent=FBgn0038730,FBtr0083798; dbxref=FlyBase:FBpp0083209,FlyBase_Annotation_IDs:CG6300-PA,GB_protein:AAF55696.2,REFSEQ:NP_650828,GB_protein:AAF55696; MD5=0887a0fea28f7ba1e12b477767cba441; length=537; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG6300 OS=Drosophila melanogaster GN=CG6300 PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(15597164..15598121,15598184..15598695,15598754..15598897); ID=FBpp0083209; name=CG6300-PA; parent=FBgn0038730,FBtr0083798; dbxref=FlyBase:FBpp0083209,FlyBase_Annotation_IDs:CG6300-PA,GB_protein:AAF55696.2,REFSEQ:NP_650828,GB_protein:AAF55696,FlyMine:FBpp0083209,modMine:FBpp0083209; MD5=0887a0fea28f7ba1e12b477767cba441; length=537; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:complement(join(19773032..19773175,19772462..19772973,19771442..19772399)); ID=FBpp0083209; name=CG6300-PA; parent=FBgn0038730,FBtr0083798; dbxref=FlyBase:FBpp0083209,FlyBase_Annotation_IDs:CG6300-PA,GB_protein:AAF55696.2,REFSEQ:NP_650828,GB_protein:AAF55696,FlyMine:FBpp0083209,modMine:FBpp0083209; MD5=0887a0fea28f7ba1e12b477767cba441; length=537; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(19773032..19773175,19772462..19772973,19771442..19772399)); ID=FBpp0083209; name=CG6300-PA; parent=FBgn0038730,FBtr0083798; dbxref=FlyBase:FBpp0083209,FlyBase_Annotation_IDs:CG6300-PA,GB_protein:AAF55696.2,REFSEQ:NP_650828,GB_protein:AAF55696,FlyMine:FBpp0083209,modMine:FBpp0083209; MD5=0887a0fea28f7ba1e12b477767cba441; length=537; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG6300 OS=Drosophila melanogaster GN=CG6300 PE=4 SV=2 [DROME.fasta.20160308]
  • FBpp0083209 type=protein; loc=3R:complement(join(19773032..19773175,19772462..19772973,19771442..19772399)); ID=FBpp0083209; name=CG6300-PA; parent=FBgn0038730,FBtr0083798; dbxref=FlyBase:FBpp0083209,FlyBase_Annotation_IDs:CG6300-PA,GB_protein:AAF55696.2,REFSEQ:NP_650828,GB_protein:AAF55696,FlyMine:FBpp0083209,modMine:FBpp0083209; MD5=0887a0fea28f7ba1e12b477767cba441; length=537; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(19773032..19773175,19772462..19772973,19771442..19772399)); ID=FBpp0083209; name=CG6300-PA; parent=FBgn0038730,FBtr0083798; dbxref=FlyBase:FBpp0083209,FlyBase_Annotation_IDs:CG6300-PA,GB_protein:AAF55696.2,REFSEQ:NP_650828,GB_protein:AAF55696,UniProt/TrEMBL:Q9VDU4,FlyMine:FBpp0083209,modMine:FBpp0083209; MD5=0887a0fea28f7ba1e12b477767cba441; length=537; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 537 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    long-chain fatty acid transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYTPENSYD NDQKIWSGEP VVKYFDPDLS IGEIIFHEMR RHPQLTAQIS ATEGTVLTRG  60
   61 ELLANAMRLA SYMRSLGLLQ SDIVGIIGRN TTHMLAVAYA CFFNGIAFHS LNITYDRDTI 120
  121 EKIYKVTRPS IIFCDGDEFE KVRSATAELD VKIVTMRNHP LDSIKIDEVV ATPIEENFQP 180
  181 AKLEKGNDQT LAILCSSGTT GTPKAVTITN SRHILAGNYH LTTADVQYSH NTLDWITGLL 240
  241 TTITSGVFST TRIIADNAFD PAFALRIIEE YKVTWTIQPP SSMALMINCP DFETCDMSSL 300
  301 RCYMFGGSRA ALEVQKGIRS RLSHDCLQFV YGFTELGAMA TINCHFDEKT GSVGQLVNGL 360
  361 KMKIINDDGE SLGPDEIGEV CIMNNQHWSG YYGNEVETRN MRDSLGWYHS GDLGYMDRDG 420
  421 FLYIMDRKKE MLKYQNIMYY PNDIESVISE MPQVAEVCVF GIWSNIFGDE AAAAVVKKLG 480
  481 SELEAQDVVD YVRSRTDSKY KQLNGGAVIV DDLQRSANGK TNRMANKAYF LHLKNRS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..537] PSI-BLAST 112.0 FIREFLY LUCIFERASE IN COMPLEX WITH BROMOFORM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity, forming carbon-sulfur bonds
    		•  5.10123876514454 bayes_pls_golite062009
  • fatty acid ligase activity
    		•  4.83067429373059 bayes_pls_golite062009
  • long-chain fatty acid-CoA ligase activity
    		•  4.72692389032116 bayes_pls_golite062009
  • acetate-CoA ligase activity
    		•  4.48129067128523 bayes_pls_golite062009
  • acid-thiol ligase activity
    		•  4.28278725989432 bayes_pls_golite062009
  • CoA-ligase activity
    		•  4.12850865352867 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)
    		•  2.74744781333102 bayes_pls_golite062009
  • Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity
    		•  2.74744781333102 bayes_pls_golite062009
  • luciferin monooxygenase activity
    		•  2.67396462766343 bayes_pls_golite062009
  • ligase activity
    		•  2.49556073715112 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.31193176808353 bayes_pls_golite062009
  • catalytic activity
    		•  1.83545185797733 bayes_pls_golite062009
  • binding
    		•  1.5312519256537 bayes_pls_golite062009
  • transcription repressor activity
    		•  1.2638869228049 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  0.464663038956639 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle