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Protein Overview: sra-PA, FBpp0310844

General Information:
Name(s) found: FBpp0310844 [FlyBase]
sra-PA / FBpp0082709 [FlyBase]
Description(s) found:
Found 31 descriptions.
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  • type=protein; loc=3R:12021759..12022637; ID=FBpp0310844; name=sra-PB; parent=FBgn0086370,FBtr0344473; dbxref=FlyBase:FBpp0310844,FlyBase_Annotation_IDs:CG6072-PB; MD5=9a9a38ec637d78ac99dc776748008b7a; length=292; release=r5.56; species=Dmel; [FlyBase]
  • The gene sarah is referred to in FlyBase by the symbol Dmel\sra (CG6072, FBgn0086370). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:12012656..12023315. It has the cytological map location 89B7. There is experimental evidence that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: olfactory learning; female meiosis; male pronucleus formation; long-term memory; regulation of female receptivity, post-mating; egg activation; regulation of female receptivity. 68 alleles are reported. The phenotypes of these alleles are annotated with: meiotic anaphase I; meiosis II; male pronucleus. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 292 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: long-term memory [IMP]
    regulation of female receptivity [IMP]
    female meiosis [IMP]
    olfactory learning [IMP]
    egg activation [IMP]
    calcium-mediated signaling [IEA]
    regulation of female receptivity, post-mating [IMP]
    male pronucleus assembly [IMP]
    meiosis I [NAS]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDAAKSNNN ASADAPDPTT PDATGEADAA NAATPTTPRG NHNNNNSANG RSKNKLKSTQ  60
   61 NSSGGGSIDK LSPDQDIFIN AADGLPNQHP SLPKEGDVDS DTEPEVDADS FDDLPTSIIV 120
  121 TNIHSEVFAN PELKHAMEEL FRTFSESATF QWLRSFRRLR VNYDNAIAAA NARIKLHQYE 180
  181 FNKKTVITCY FAQPVTPVSN KNLQPPAPVK QFLISPPASP PAGWEPREEG EPLVNHDLLA 240
  241 ALASLTPGES HELHPQSEDQ PAIIVHTAML AETGPGLQVK APIVQTKCPE RA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..104] deduced N/A No confident structure predictions are available.
    2 View Details [105..292] PSI-BLAST 34.522879 Solution structure of RRM domain in calcipressin 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • nucleic acid binding
    		•  4.11118333721636 bayes_pls_golite062009
  • binding
    		•  3.64400841800969 bayes_pls_golite062009
  • RNA binding
    		•  2.45916448091535 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.9432590957792 bayes_pls_golite062009
  • hydrolase activity
    		•  1.69824301409862 bayes_pls_golite062009
  • mRNA binding
    		•  1.62410365165765 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.24650529385826 bayes_pls_golite062009
  • DNA binding
    		•  1.23082363146877 bayes_pls_golite062009
  • protein binding
    		•  1.12215421354121 bayes_pls_golite062009
  • transcription factor activity
    		•  0.426324573266235 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.0605038543305221 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle