YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: FBpp0311938, CG6...

General Information:
Name(s) found: FBpp0311938 [FlyBase]
CG6125-PB / FBpp0082559 [FlyBase]
Description(s) found:
Found 27 descriptions.
SHOW ALL
  • type=protein; loc=3R:complement(11228751..11229104,11229161..11229346,11229408..11229670,11229742..11230078,11230364..11231028,11232623..11232653); ID=FBpp0311938; name=CG6125-PC; parent=FBgn0038337,FBtr0346109; dbxref=FlyBase:FBpp0311938,FlyBase_Annotation_IDs:CG6125-PC; MD5=6cb9d3e62a018b5bebc63620bc86f8af; length=611; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG6125 (CG6125, FBgn0038337). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:11228526..11232789. It has the cytological map location 88F4. Based on sequence similarity, it is predicted to have molecular function</span>: high affinity sulfate transmembrane transporter activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: transmembrane transport. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 611 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    Biological Process: transmembrane transport [IEA]
    Molecular Function: high affinity sulfate transmembrane transporter activity [ISS]
    transporter activity [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIVKKLSFD AGCEEKEKYT AQNGDDYYGQ AHTVDLDVAS KYSKPKEAHW LVRRIFFLSW  60
   61 ITSYDREQAF ADLIAGITLG LTIIPQSIAY AALAGLSSEY GLYSAFIGSI IYVFFGTIPQ 120
  121 VSIGPTSLMA ILTLQFCADK PVQVVIVLAF LAGLVELAMG VFQLGFIVSF IPAPVTKAFT 180
  181 SGTALIVVFA QIKNLLGVRI KGFPSIGDFF TNIRPTDAAM GISCMVVLLS LRLLSQVNFK 240
  241 QDTPVTRRLK KILWYISISR NALVVFFTGL LVFIWVKKSS IEAVPFALSS KVSSAMPTIK 300
  301 LPPFAFEYQN RTYVFTDILH ELGSGIVVVP IVAVLANVAI AKAFVKDGNL DASQEMLTLG 360
  361 LCNIAGSFFS AMPTCGAFTR SAVSQASGVR TPMAGIYTGL IVLSALSILT PYFQYIPKAS 420
  421 LSAVLIAAVI FMIDLAPVKE LWQTNKKDFF SWVGSFIICL VAGVELGLLF GIVLSMVFIL 480
  481 LRLGNPKFEV TLKQHESTYY VHIVPQSDVY YTGVDALRSE LRGACRLYHN DFPVVLDCAR 540
  541 FMQFDATFSE MLISVAKEMA SHDVLLILQN MSLKVQQMLP VMGNVRFCQE DSQLSSHLQV 600
  601 EKEAPVVEAK L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..239] MSA 6.894993 View MSA. No confident structure predictions are available.
    2 View Details [240..350] deduced N/A No confident structure predictions are available.
    3 View Details [351..484] MSA 5.909996 View MSA. No confident structure predictions are available.
    4 View Details [485..611] PSI-BLAST 6.39794 SOLUTION STRUCTURE OF SPOIIAA, A PHOSPHORYLATABLE COMPONENT OF THE SYSTEM THAT REGULATES TRANSCRIPTION FACTOR SIGMA-F OF BACILLUS SUBTILIS, NMR, 24 STRUCTURES

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  1.97991551312897 bayes_pls_golite062009
  • protein binding
    		•  1.39062728142841 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle