| Protein: | FBpp0311938, CG6... |
| Organism: | Drosophila melanogaster |
| Length: | 611 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0311938, CG6....
| Description | E-value | Query Range |
Subject Range |
|
|
348.0 | [0..16] | [602..40] |
|
Region A: Residues: [1-239] |
1 11 21 31 41 51
| | | | | |
1 MSIVKKLSFD AGCEEKEKYT AQNGDDYYGQ AHTVDLDVAS KYSKPKEAHW LVRRIFFLSW 60
61 ITSYDREQAF ADLIAGITLG LTIIPQSIAY AALAGLSSEY GLYSAFIGSI IYVFFGTIPQ 120
121 VSIGPTSLMA ILTLQFCADK PVQVVIVLAF LAGLVELAMG VFQLGFIVSF IPAPVTKAFT 180
181 SGTALIVVFA QIKNLLGVRI KGFPSIGDFF TNIRPTDAAM GISCMVVLLS LRLLSQVNF
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [240-350] |
1 11 21 31 41 51
| | | | | |
1 KQDTPVTRRL KKILWYISIS RNALVVFFTG LLVFIWVKKS SIEAVPFALS SKVSSAMPTI 60
61 KLPPFAFEYQ NRTYVFTDIL HELGSGIVVV PIVAVLANVA IAKAFVKDGN L
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [351-484] |
1 11 21 31 41 51
| | | | | |
1 DASQEMLTLG LCNIAGSFFS AMPTCGAFTR SAVSQASGVR TPMAGIYTGL IVLSALSILT 60
61 PYFQYIPKAS LSAVLIAAVI FMIDLAPVKE LWQTNKKDFF SWVGSFIICL VAGVELGLLF 120
121 GIVLSMVFIL LRLG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [485-611] |
1 11 21 31 41 51
| | | | | |
1 NPKFEVTLKQ HESTYYVHIV PQSDVYYTGV DALRSELRGA CRLYHNDFPV VLDCARFMQF 60
61 DATFSEMLIS VAKEMASHDV LLILQNMSLK VQQMLPVMGN VRFCQEDSQL SSHLQVEKEA 120
121 PVVEAKL
|
| Detection Method: | |
| Confidence: | 6.39794 |
| Match: | 1auzA |
| Description: | SOLUTION STRUCTURE OF SPOIIAA, A PHOSPHORYLATABLE COMPONENT OF THE SYSTEM THAT REGULATES TRANSCRIPTION FACTOR SIGMA-F OF BACILLUS SUBTILIS, NMR, 24 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.97991551312897 | bayes_pls_golite062009 |
| protein binding | 1.39062728142841 | bayes_pls_golite062009 |
