Protein Overview: primo-2-PC

General Information:
Name(s) found:	primo-2-PC / FBpp0100064 [FlyBase]
Description(s) found: Found 31 descriptions. SHOW ALL	The gene primo-2 is referred to in FlyBase by the symbol Dmel\primo-2 (CG33747, FBgn0040076). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:9535748..9537557. It has the cytological map location 87F12. Based on sequence similarity, it is predicted to have molecular function</span>: protein tyrosine phosphatase activity; acid phosphatase activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: protein amino acid dephosphorylation. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
Organism:	Drosophila melanogaster
Length:	164 amino acids
Gene Ontology:
Cellular Component:	cytoplasm [IEA][NAS]
Biological Process:	protein amino acid dephosphorylation [ISS][NAS]
Molecular Function:	non-membrane spanning protein tyrosine phosphatase activity [IEA] protein tyrosine phosphatase activity [ISS][NAS] acid phosphatase activity [IEA][ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKRSQKSSV LMVCVGNLCR SPIAEAVMRD LVARAGLQGE WHVESAGIED WHSGHQPDER  60
   61 ALNVLARHNI EYNGKARVLA PEDFLEFDYI FAMDLSNLAA LRRMAPKGTT AKLLILGNFG 120
  121 LKPDERIIED PYYDIGEASF EEIYRQCSIA CRNFLKQARL KQIM

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
phosphoprotein phosphatase activity	6.88246946508693	bayes_pls_golite062009
phosphatase activity	6.45415826301085	bayes_pls_golite062009
phosphoric ester hydrolase activity	6.24793868976995	bayes_pls_golite062009
protein tyrosine phosphatase activity	5.42677419561083	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	5.27901564747165	bayes_pls_golite062009
hydrolase activity	3.65742648154352	bayes_pls_golite062009
catalytic activity	1.99182579317454	bayes_pls_golite062009
binding	1.7522117458664	bayes_pls_golite062009
transcription regulator activity	0.628751319213679	bayes_pls_golite062009
acid phosphatase activity	0.62303289859123	bayes_pls_golite062009
nucleic acid binding	0.557666750724006	bayes_pls_golite062009
DNA binding	0.357202336581626	bayes_pls_golite062009
protein binding	0.332591807861153	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..164]	PSI-BLAST	44.39794	CRYSTAL STRUCTURE OF A HUMAN LOW MOLECULAR WEIGHT PHOSPHOTYROSYL PHOSPHATASE. IMPLICATIONS FOR SUBSTRATE SPECIFICITY

Protein Overview: primo-2-PC

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: