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Protein Overview: gi|28571658, gi|...

General Information:
Name(s) found: gi|28571658 [NCBI NR]
gi|28381261 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|28571658|ref|NP_731647.2| CG31368, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|28381261|gb|AAF54713.3| CG31368, isoform A [Drosophila melanogaster] [NCBI NR]
    • Organism: Drosophila melanogaster
    Length: 1480 amino acids

    Gene Ontology:
    Cellular Component: catalytic step 2 spliceosome [IDA]
    precatalytic spliceosome [IDA]
    Biological Process: nuclear mRNA splicing, via spliceosome [IC]
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    ATP-dependent helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRRSQTRAE QAVPPAKTTK ENSGSLTVSQ LSSDVIWQLA SQYWTPDTKA DHLPYSAKII  60
   61 ERIYNEEIGD GGGHSARRIN MLEFSQYLEQ YLWPHYQRET ATHAHLMSIV IMANEKFRER 120
  121 VEVWTVFEKL PDQYPAFFRH VLESCLPSKK AKEASSTLRE RTALLMFINH CFNSMEIELC 180
  181 REQAKRLVSL SMWHCLQPRR REQELREVPE WRKYWKRLLK KEKDSKPEVL WERHFMQNLI 240
  241 IDFLHILESI PAEGEVPRNV VHYCERFLEF IIDLEALLPT RRFFNTVLDD CHLIVRALLS 300
  301 PLVRREEGKL FGQFYTRFEI NDVTGSSLTD HDMTQLHYKK ITSLQRAVFA KFPSLRVFAL 360
  361 SNVATVDNRE SLEQHFGGLD GKGLLQIATF LNLVPEEVVS PLDWHRVDEQ FLRELLITRH 420
  421 ERRCSQLEAL NEMPLYPTEQ IIWDENVVPS EYYSGDSCLA LPKLNLQFLT LHDYLLRNFN 480
  481 LFRLESTYEI RQDIEDAVSR MLPWKSEDGD VVFGGWARMA LPIASFAVVE VAKPHLGEKK 540
  541 PSRVRADVGV TLSVRREIKA EWENLRKHDV CFLITVKPTQ PYGTKYKHRE PFVPQVGLVS 600
  601 VRGCEVEGML DANGRVIEDG PEPRPQLQGE NRCYRVWLDS NQYRLDMDDL QEGADDVYES 660
  661 FNILMRRKPK ENNFKAVLET IRHLMNTECV VPPWLHDILL GYGDPGAAHY SNMPNQERSL 720
  721 EFNDTFMDYN HLEASFPQYN LKCEVPVENR QPPFRLIFED VPIQKESDGE DPEEKPEEKL 780
  781 TKSILVQPYK YEARGPYPSD KPKQNSIRFT PTQVEAIRAG MQPGLTLVVG PPGTGKTDVA 840
  841 VQIISNIYHN HPNQRTLIVT HSNQALNQLF EKIMALDIDE RHLLRLGHGE EALETEKDYS 900
  901 RYGRVNYVLA KRMDLLSQVQ KLQEALGVSG DNAYTCETAG YFYLYNVMAR WEKFQSQISV 960
  961 HKGEADAEKL RAEFEKEFPF GKFFADAPQP LFKGANYDEL MDIACSNFRY ISDIFNELEE1020
 1021 FRAFELLRTG LDRSKYLLVK EAKIIAMTCT HAALKRKELV NLGFRYDNIL MEESAQILEI1080
 1081 ETFIPLLLQN PLDGLNRLKR WIMIGDHHQL PPVIKNMAFQ KYSNMEQSLF TRLVRLGVPT1140
 1141 VDLDGQGRAR ASICSLYKWR YKKLEDLQHI FERDEYKQAN PGFVHDYQLI NVEDFKGVGE1200
 1201 SEPNPYFYQN LAEAEYIVAV YMYMRLLGYP AAKISILTTY NGQKHLIRDV INARCGNNPL1260
 1261 IGWPHKITTV DKYQGQQNDY ILISLVRTKA VGHLRDVRRL VVAMSRARLG LYVFGRVSLF1320
 1321 KNCLELQQTF KLLTQRPLKL SLVPEDKFPT DRLASAAVAS QDIKTVENMS EMAQFVYERY1380
 1381 MAKMEELKGT LPSEEELEAM RNQLLQEDEE SVPEASEEPP EKRAAKEEPL SKKKTTEAFK1440
 1441 PTPILNEINV DDTEMGQREQ IEEEATDQDK TQESAPAEES

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..252] MSA 2.032941 View MSA. No confident structure predictions are available.
    2 View Details [253..519] deduced N/A No confident structure predictions are available.
    3 View Details [520..620] PSI-BLAST 15.221849 No description for 2iykA was found.
    4 View Details [621..684] deduced N/A No confident structure predictions are available.
    5 View Details [685..807] PSI-BLAST 74.0 No description for 2gjkA was found.
    6 View Details [808..1480] PSI-BLAST 110.0 No description for 2is1A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle