YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|28571658, gi|...
Organism: Drosophila melanogaster
Length: 1480 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|28571658, gi|....

Description E-value Query
Range
Subject
Range
gi|45553341, gi|... - gi|45553341|ref|NP_996198.1| CG31368, isoform B [Drosophila melanogaster], gi|45446459|gb|AAS65141.1...
1406.0 [0..1] [1480..1]

Back

Predicted Domain #1
Region A:
Residues: [1-252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRRSQTRAE QAVPPAKTTK ENSGSLTVSQ LSSDVIWQLA SQYWTPDTKA DHLPYSAKII  60
   61 ERIYNEEIGD GGGHSARRIN MLEFSQYLEQ YLWPHYQRET ATHAHLMSIV IMANEKFRER 120
  121 VEVWTVFEKL PDQYPAFFRH VLESCLPSKK AKEASSTLRE RTALLMFINH CFNSMEIELC 180
  181 REQAKRLVSL SMWHCLQPRR REQELREVPE WRKYWKRLLK KEKDSKPEVL WERHFMQNLI 240
  241 IDFLHILESI PA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [253-519]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGEVPRNVVH YCERFLEFII DLEALLPTRR FFNTVLDDCH LIVRALLSPL VRREEGKLFG  60
   61 QFYTRFEIND VTGSSLTDHD MTQLHYKKIT SLQRAVFAKF PSLRVFALSN VATVDNRESL 120
  121 EQHFGGLDGK GLLQIATFLN LVPEEVVSPL DWHRVDEQFL RELLITRHER RCSQLEALNE 180
  181 MPLYPTEQII WDENVVPSEY YSGDSCLALP KLNLQFLTLH DYLLRNFNLF RLESTYEIRQ 240
  241 DIEDAVSRML PWKSEDGDVV FGGWARM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [520-620]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALPIASFAVV EVAKPHLGEK KPSRVRADVG VTLSVRREIK AEWENLRKHD VCFLITVKPT  60
   61 QPYGTKYKHR EPFVPQVGLV SVRGCEVEGM LDANGRVIED G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.221849
Match: 2iykA
Description: No description for 2iykA was found.

Predicted Domain #4
Region A:
Residues: [621-684]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEPRPQLQGE NRCYRVWLDS NQYRLDMDDL QEGADDVYES FNILMRRKPK ENNFKAVLET  60
   61 IRHL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [685-807]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTECVVPPW LHDILLGYGD PGAAHYSNMP NQERSLEFND TFMDYNHLEA SFPQYNLKCE  60
   61 VPVENRQPPF RLIFEDVPIQ KESDGEDPEE KPEEKLTKSI LVQPYKYEAR GPYPSDKPKQ 120
  121 NSI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.0
Match: 2gjkA
Description: No description for 2gjkA was found.

Predicted Domain #6
Region A:
Residues: [808-1480]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RFTPTQVEAI RAGMQPGLTL VVGPPGTGKT DVAVQIISNI YHNHPNQRTL IVTHSNQALN  60
   61 QLFEKIMALD IDERHLLRLG HGEEALETEK DYSRYGRVNY VLAKRMDLLS QVQKLQEALG 120
  121 VSGDNAYTCE TAGYFYLYNV MARWEKFQSQ ISVHKGEADA EKLRAEFEKE FPFGKFFADA 180
  181 PQPLFKGANY DELMDIACSN FRYISDIFNE LEEFRAFELL RTGLDRSKYL LVKEAKIIAM 240
  241 TCTHAALKRK ELVNLGFRYD NILMEESAQI LEIETFIPLL LQNPLDGLNR LKRWIMIGDH 300
  301 HQLPPVIKNM AFQKYSNMEQ SLFTRLVRLG VPTVDLDGQG RARASICSLY KWRYKKLEDL 360
  361 QHIFERDEYK QANPGFVHDY QLINVEDFKG VGESEPNPYF YQNLAEAEYI VAVYMYMRLL 420
  421 GYPAAKISIL TTYNGQKHLI RDVINARCGN NPLIGWPHKI TTVDKYQGQQ NDYILISLVR 480
  481 TKAVGHLRDV RRLVVAMSRA RLGLYVFGRV SLFKNCLELQ QTFKLLTQRP LKLSLVPEDK 540
  541 FPTDRLASAA VASQDIKTVE NMSEMAQFVY ERYMAKMEEL KGTLPSEEEL EAMRNQLLQE 600
  601 DEESVPEASE EPPEKRAAKE EPLSKKKTTE AFKPTPILNE INVDDTEMGQ REQIEEEATD 660
  661 QDKTQESAPA EES

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 110.0
Match: 2is1A
Description: No description for 2is1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle