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Protein Overview: Rbp1-PD

General Information:
Name(s) found: Rbp1-PD / FBpp0081754 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • The gene RNA-binding protein 1 is referred to in FlyBase by the symbol Dmel\Rbp1 (CG17136, FBgn0260944). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:6610104..6612194. It has the cytological map location 86C6. There is experimental evidence that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: RNA splicing. 29 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 144 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][NAS]
    Biological Process: RNA splicing [IMP]
    mRNA splice site selection [ISS]
    nuclear mRNA splicing, via spliceosome [ISS][NAS]
    Molecular Function: nucleic acid binding [IEA]
    nucleotide binding [IEA]
    protein binding [IPI]
    mRNA binding [ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRYREWDLA CKVYVGNLGS SASKHEIEGA FAKYGPLRNV WVARNPPGFA FVEFEDRRDA  60
   61 EDATRALDGT RCCGTRIRVE MSSGRSRDRR RGEGGSSGRS GSGRYRITPS ARTTSTATSS 120
  121 FYNINNLQQQ PSSQPQPATF NLQL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..144] PSI-BLAST 21.69897 No description for 2i2yA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle