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Protein Overview: FBpp0306742, CG9...

General Information:
Name(s) found: FBpp0306742 [FlyBase]
CG9461-PA / FBpp0081633 [FlyBase]
Description(s) found:
Found 24 descriptions.
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  • type=protein; loc=3R:complement(5630611..5630740,5630822..5631896,5631960..5632140,5632242..5634404); ID=FBpp0306742; name=FBX011-PB; parent=FBgn0037760,FBtr0334684; dbxref=FlyBase:FBpp0306742,FlyBase_Annotation_IDs:CG9461-PB,REFSEQ:NP_001262441,GB_protein:AGB95823; MD5=b9bea12fad1f3d417ba6c2f3d5399387; length=1182; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG9461 (CG9461, FBgn0037760). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:5630494..5635085. It has the cytological map location 85E9-85E10. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: ubiquitin-protein ligase activity; zinc ion binding. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1182 amino acids

    Gene Ontology:
    Cellular Component: perinuclear region of cytoplasm [IDA]
    cytoplasm [IDA]
    Biological Process: regulation of gene silencing by RNA [IMP]
    siRNA loading onto RISC involved in chromatin silencing by small RNA [IMP]
    Molecular Function: ubiquitin-protein ligase activity [IEA]
    zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSASFTSSR TYVRRSRRKG ANRIAMPNRP TGNIMDPMLQ QNVTAAGAGA SASGSNSNAA  60
   61 SSSGAGGVGN NNASSSGSSG ATSTSGSAAA AASAAGPTAA GASSSAEYFD SGQGASGSSG 120
  121 AASSGFSGSF YNALQMMDTT ESSGAGTSQS TPPALGASST TASKSTCATV GSSTASTSAA 180
  181 AAAAASASAG SSHQSPYDLR RKISASSHEQ WPTSSSSAVA AAAAILVGPS SSSPPLVNPG 240
  241 ASPSSSSSSS SSSSSSSSAS SSSSSSNVQA PSTSATFPVN NAPTTGATLA QPPNVHSSVP 300
  301 QQHCGALPVG AAIEDNNYML PARKRSRRLY TQGGEMGPSA GATGEAAGAG TAASGGAGCA 360
  361 PTAAQYLQYE LPDEVLLAIF SYLMEQDLCR LALVCKRFNT IANDTELWKR LYQSVFEYDL 420
  421 PLFNPELCKF VFEKPEESEY ANPWKESFRQ LYRGVHVRPG YQERRSSGRS IVFFNTIQAA 480
  481 LDYPEERAAA GVFVPAGAGA GNVVSAGLSN TSASAGVGGA SVNALVNIYE EQVAPTEHPG 540
  541 PLIFLHAGHY KGEYLFIDSD VALVGAAPGN VAESVILERE AGSTVMFVEG AKYAYVGYLT 600
  601 LKFSPEVTST VSHHKHYCLD IGENCSPTVD NCIIRSTSVV GAAVCVGGVN ANPVIRNCDI 660
  661 SDCENVGLYV TDYAQGTYEH NEISRNALAG IWVKNFASPI MRENHIHHGR DVGIFTFENG 720
  721 MGYFEKNDIH NNRIAGFEVK AGANPTVVKC EIHHGQTGGI YVHENGLGQF IENRIHSNNF 780
  781 AGVWITSNSN PTIRKNEIYN GHQGGVYIFG EGRGLIEHNN IYGNALAGIQ IRTNSDPIVR 840
  841 HNKIHHGQHG GIYVHEKGQG LIEENEVYSN TLAGVWITTG STPVLRRNRI HSGKQVGVYF 900
  901 YDNGHGKLED NDIFNHLYSG VQIRTGSNPV IRGNKIWGGQ NGGVLVYNGG LGLLEQNEIF 960
  961 DNAMAGVWIK TDSNPTLKRN KIYDGRDGGI CIFNGGKGIL EENDIFRNTQ AGVLISTQSH1020
 1021 PILRRNRIYD GQAAGVEITN NATATLEHNQ IFKNKFGGLC LASGVQPITR GNNIFNNEDE1080
 1081 VEKAVSSGQC LYKISSYTSF PMHDFYRCQT CNTTDRNAIC VNCIKNCHAG HDVEFIRHDR1140
 1141 FFCDCGAGTL SNQCQLQGEP TQDTDTLYDS AAPMESHTLM VN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] MSA 6.253996 View MSA. No confident structure predictions are available.
    2 View Details [128..330] MSA 2.253996 View MSA. No confident structure predictions are available.
    3 View Details [331..515] FFAS03 1.74 No description for 2e31A was found.
    4 View Details [516..824] PSI-BLAST 3.30103 No description for 2uveA was found.
    5 View Details [825..919] PSI-BLAST 3.522879 Botulinum neurotoxin
    6 View Details [920..1182] PSI-BLAST 6.30103 No description for 2inuA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.63

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle