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View Structure Prediction Details

Protein: FBpp0306742, CG9...
Organism: Drosophila melanogaster
Length: 1182 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0306742, CG9....

Description E-value Query
Range
Subject
Range
gi|50739002 - gi|50739002|ref|XP_419357.1| PREDICTED: similar to F-box only protein 11 [Gallus gallus]
924.0 [0..294] [1182..799]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSASFTSSR TYVRRSRRKG ANRIAMPNRP TGNIMDPMLQ QNVTAAGAGA SASGSNSNAA  60
   61 SSSGAGGVGN NNASSSGSSG ATSTSGSAAA AASAAGPTAA GASSSAEYFD SGQGASGSSG 120
  121 AASSGFS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [128-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSFYNALQMM DTTESSGAGT SQSTPPALGA SSTTASKSTC ATVGSSTAST SAAAAAAASA  60
   61 SAGSSHQSPY DLRRKISASS HEQWPTSSSS AVAAAAAILV GPSSSSPPLV NPGASPSSSS 120
  121 SSSSSSSSSS SASSSSSSSN VQAPSTSATF PVNNAPTTGA TLAQPPNVHS SVPQQHCGAL 180
  181 PVGAAIEDNN YMLPARKRSR RLY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [331-515]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TQGGEMGPSA GATGEAAGAG TAASGGAGCA PTAAQYLQYE LPDEVLLAIF SYLMEQDLCR  60
   61 LALVCKRFNT IANDTELWKR LYQSVFEYDL PLFNPELCKF VFEKPEESEY ANPWKESFRQ 120
  121 LYRGVHVRPG YQERRSSGRS IVFFNTIQAA LDYPEERAAA GVFVPAGAGA GNVVSAGLSN 180
  181 TSASA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.74
Match: 2e31A
Description: No description for 2e31A was found.

Predicted Domain #4
Region A:
Residues: [516-824]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVGGASVNAL VNIYEEQVAP TEHPGPLIFL HAGHYKGEYL FIDSDVALVG AAPGNVAESV  60
   61 ILEREAGSTV MFVEGAKYAY VGYLTLKFSP EVTSTVSHHK HYCLDIGENC SPTVDNCIIR 120
  121 STSVVGAAVC VGGVNANPVI RNCDISDCEN VGLYVTDYAQ GTYEHNEISR NALAGIWVKN 180
  181 FASPIMRENH IHHGRDVGIF TFENGMGYFE KNDIHNNRIA GFEVKAGANP TVVKCEIHHG 240
  241 QTGGIYVHEN GLGQFIENRI HSNNFAGVWI TSNSNPTIRK NEIYNGHQGG VYIFGEGRGL 300
  301 IEHNNIYGN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.30103
Match: 2uveA
Description: No description for 2uveA was found.

Predicted Domain #5
Region A:
Residues: [825-919]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALAGIQIRTN SDPIVRHNKI HHGQHGGIYV HEKGQGLIEE NEVYSNTLAG VWITTGSTPV  60
   61 LRRNRIHSGK QVGVYFYDNG HGKLEDNDIF NHLYS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.522879
Match: 1epwA
Description: Botulinum neurotoxin
Matching Structure (courtesy of the PDB):

Predicted Domain #6
Region A:
Residues: [920-1182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVQIRTGSNP VIRGNKIWGG QNGGVLVYNG GLGLLEQNEI FDNAMAGVWI KTDSNPTLKR  60
   61 NKIYDGRDGG ICIFNGGKGI LEENDIFRNT QAGVLISTQS HPILRRNRIY DGQAAGVEIT 120
  121 NNATATLEHN QIFKNKFGGL CLASGVQPIT RGNNIFNNED EVEKAVSSGQ CLYKISSYTS 180
  181 FPMHDFYRCQ TCNTTDRNAI CVNCIKNCHA GHDVEFIRHD RFFCDCGAGT LSNQCQLQGE 240
  241 PTQDTDTLYD SAAPMESHTL MVN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.30103
Match: 2inuA
Description: No description for 2inuA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle