YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: p-PA

General Information:
Name(s) found: p-PA / FBpp0081373 [FlyBase]
Description(s) found:
Found 25 descriptions.
SHOW ALL
  • The gene pink is referred to in FlyBase by the symbol Dmel\p (CG9770, FBgn0086679). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:4486622..4489607. It has the cytological map location 85A6. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: compound eye pigmentation; ommochrome biosynthetic process. 36 alleles are reported. The phenotypes of these alleles are annotated with: Malpighian tubule; pigment cell. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 826 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDA]
    Biological Process: ommochrome biosynthetic process [IMP]
    compound eye pigmentation [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADAYCLTNF IDFSLSLSLP LKHHNRIKYT CFDISDSYII FGASSGSLYL FNRNGKFLLL  60
   61 IPNKHGAITS LSISANSKYV AFATQRSLIC VYAVNLSAQA TPQVIFTHLD QSVQVTCIHW 120
  121 TQDEKQFYYG DSRGQVSLVL LSSFIGHSLL FNMTVHPLLY LDSPIVQIDD FEYLLLVSNC 180
  181 TKCILCNTEY EDYKQIGNRP RDGAFGACFF VSPQESLQPS RIYCARPGSR VWEVDFEGEV 240
  241 IQTHQFKTAL ATAPARIQRP GSGTDELDAN AELLDYQPQN LQFAKVQRLN DDFLLAFTEL 300
  301 GLYIFDIRRS AVVLWSNQFE RIADCRSSGS EIFVFTQSGA LYSVQLQTLQ SHAVSLIQQS 360
  361 KLLPCANLLR QHVRYFADKA REDYELKQLN PLKQLLIERQ EYELLNDISV IFDAITQCTG 420
  421 SALDTHSSGG SSATTERSLS GGSSSRAPPK GVYVLENAFC DNLKQPLKTG HFKDALLTVT 480
  481 GKFGKNIIKY KFNIFAEEQQ QLVRELIPAS ERSLPFKDIK ARYESGSEDQ EEEIVRRCKK 540
  541 PAPQVPHISP EEKTLYNLYL IAKSAKFSRT QCVDRYRAVF DEYAAGELVN LLEKLAQVMV 600
  601 EHGDTPDQAQ RNCYEMYFDY LDPEMIWEVD DATRDHIAAG FVLLNTSQNA EIVKCEHCSF 660
  661 PLRFDTSCQY HELGAVLLRY FWSRGEQLKC FDVVQSVPAL LDVLAKFYLA EQNLTKVVAI 720
  721 VLNYGLPELL ADVGKQLSVS AWGRCFEQFV ELQRGGRLVC ANCECISGVE QEQLGRHFFY 780
  781 NWNCFLNIAL DHMSAGDTLA LIFKWSSYIP NDAIDREFYS RCLLKG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..602] PSI-BLAST 52.0 Actin interacting protein 1
    2 View Details [603..826] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.34904600386994 bayes_pls_golite062009
  • protein binding
    		•  1.24173112731149 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle