| Protein: | p-PA |
| Organism: | Drosophila melanogaster |
| Length: | 826 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for p-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
637.0 | [0..2] | [743..756] |
|
Region A: Residues: [1-602] |
1 11 21 31 41 51
| | | | | |
1 MADAYCLTNF IDFSLSLSLP LKHHNRIKYT CFDISDSYII FGASSGSLYL FNRNGKFLLL 60
61 IPNKHGAITS LSISANSKYV AFATQRSLIC VYAVNLSAQA TPQVIFTHLD QSVQVTCIHW 120
121 TQDEKQFYYG DSRGQVSLVL LSSFIGHSLL FNMTVHPLLY LDSPIVQIDD FEYLLLVSNC 180
181 TKCILCNTEY EDYKQIGNRP RDGAFGACFF VSPQESLQPS RIYCARPGSR VWEVDFEGEV 240
241 IQTHQFKTAL ATAPARIQRP GSGTDELDAN AELLDYQPQN LQFAKVQRLN DDFLLAFTEL 300
301 GLYIFDIRRS AVVLWSNQFE RIADCRSSGS EIFVFTQSGA LYSVQLQTLQ SHAVSLIQQS 360
361 KLLPCANLLR QHVRYFADKA REDYELKQLN PLKQLLIERQ EYELLNDISV IFDAITQCTG 420
421 SALDTHSSGG SSATTERSLS GGSSSRAPPK GVYVLENAFC DNLKQPLKTG HFKDALLTVT 480
481 GKFGKNIIKY KFNIFAEEQQ QLVRELIPAS ERSLPFKDIK ARYESGSEDQ EEEIVRRCKK 540
541 PAPQVPHISP EEKTLYNLYL IAKSAKFSRT QCVDRYRAVF DEYAAGELVN LLEKLAQVMV 600
601 EH
|
| Detection Method: |  |
| Confidence: | 52.0 |
| Match: | 1nr0A |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.34904600386994 | bayes_pls_golite062009 |
| protein binding | 1.24173112731149 | bayes_pls_golite062009 |
|
Region A: Residues: [603-826] |
1 11 21 31 41 51
| | | | | |
1 GDTPDQAQRN CYEMYFDYLD PEMIWEVDDA TRDHIAAGFV LLNTSQNAEI VKCEHCSFPL 60
61 RFDTSCQYHE LGAVLLRYFW SRGEQLKCFD VVQSVPALLD VLAKFYLAEQ NLTKVVAIVL 120
121 NYGLPELLAD VGKQLSVSAW GRCFEQFVEL QRGGRLVCAN CECISGVEQE QLGRHFFYNW 180
181 NCFLNIALDH MSAGDTLALI FKWSSYIPND AIDREFYSRC LLKG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
