General Information: |
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Name(s) found: |
lds-PA /
FBpp0081255
[FlyBase]
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Description(s) found:
Found 21 descriptions. SHOW ALL |
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Organism: | Drosophila melanogaster |
Length: | 1061 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleus
[NAS]
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Biological Process: |
transcription termination
[IDA]
termination of RNA polymerase II transcription [ISS] |
Molecular Function: |
ATP binding
[IEA]
DNA binding [IEA] DNA-dependent ATPase activity [IDA][ISS] RNA polymerase II transcription termination factor activity [ISS] helicase activity [IEA] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MSSENSEYYS DKEEDSVVNN SSLGRSRKSS RLSKSSRLSK SSRPSSAGVV IDETQSEEEE 60 61 SQSSETAESE KSDESDNSQN SQESEDSEDD SVRPSARNTK RKPLGIPSDS EDEEDELEQR 120 121 ALSPSTRMSI TGVRPQDLSD DDSEIEYSDE VQEGPTEAPT AEAVVPRYTT QFAGNIQNDL 180 181 HSTIGAADSE VLDDSSGSDV LILSNKETPI EILSSTDDDA TTNKENMSGP PFERPSKSLS 240 241 PRSSAGASVV KTSKNLSQPT IQAVLKQKTS PAAPRRSRIK SEDQKVVSQV VYDEEMRKLA 300 301 EKRVQVSDAE KLFEKVAHKL PDKGSQIMKR IDTLRRELAM DEQWISALRV QQSNVPAVRV 360 361 VKPTLNPPRA PSIDTLDWDE LSEAVNEIKP VYTGAQGMAT FNNQKALTLE SLKDLHVSLE 420 421 DLPGPEVLAE DPVGLKVSLM NHQKHALAWM SWRERKLPRG GILADDMGLG KTLTMISSVL 480 481 ACKNGQEMSE GKDESSDSDS EDDKNKKRKS VTGWKSKGRK DTRRGGTLVV CPASLLRQWE 540 541 SEVESKVSRQ KLTVCVHHGN NRETKGKYLR DYDIVVTTYQ IVAREHKSLS AVFGVKWRRI 600 601 ILDEAHVVRN HKSQSSLAVC DLRGKYRWAL TGTPIQNKEL DVYALLKFLR CSPFDDLHTW 660 661 KKWIDNKSAG GQNRLNLLMK SLMLRRTKAQ LQSDGKLNSL PNKELRLIEI SLDKEEMNVY 720 721 QTVMTYSRTL FAQFLHQRAE RETDFNYRSD ANKPTYNQIK DPNGAYYKMH EKFARMAGSK 780 781 KEVKSHDILV LLLRLRQICC HPGLIDAMLD GEESQTMGDH SSDSDTPEID LLAQLNKLAI 840 841 TDTSTDGQQS VANAGDDGPP LLPDEARIAK ASKNLLKRSN PVFNLHRPSS KINMVIQILK 900 901 TSILKSSDDK AIVVSQWTSV LDILRDHLSK DGVATLSLNG TIPVKNRQDI VNEFNDRNNQ 960 961 KRVLLLSLTA GGVGLNLIGA NHLLLLDLHW NPQLEAQAQD RIYRVGQKKN VIIYKFMCVD1020 1021 TVEQRIKGLQ DKKLDLADGV LTGAKVSSKL TIDDLKGLFG M |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..202] | N/A | No confident structure predictions are available. | |
2 | View Details | [203..430] | N/A | No confident structure predictions are available. | |
3 | View Details | [431..900] | 47.221849 | Sulfolobus solfataricus SWI2/SNF2 ATPase core in complex with dsDNA | |
4 | View Details | [901..994] | 17.39794 | Initiation factor 4a | |
5 | View Details | [995..1061] | 49.69897 | Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54 |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.72 |
Source: Reynolds et al. (2008)